Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1661 ATGAGTAGCACCACTTCAATTTTCATGGTCTCAACTTTGTACATCCTCTTATTGTCCCTTCCTGATCACATGTCAGCACATTATATCATTGGACATAGTGGCCAGAGGAGTAAAGGCGGCGGCGGCGGAGGAGATGGTAAAAAATCACCACATATTCTAGCAGCTCCAGCTTCACCTCTCAATACAGAAACTCTTGTATTTAAAGACCAAAGGCTTCAAGTAGTGTACCCAGTAATACAAAAATTCAAGTCCATCATCACTTCAGATCCCTTAGGAGTTACAAAATCATGGATAGGCTCAGATATATGCAGCTACAAAGGGTTCTATTGTGATACTCCACCAGACAATTCATCTGCTATTGCTTTGGCCTCAATAGACTTCAATGGTTTTCAACTTGGTGCTTCTACCCTTGATGGGTTTATTGATAATCTTCCTGATATTGCTCTTTTTCATGCAAACTCCAACAATTTTACTGGCACTATCTCATCACAAATTGCAAAACTACCCTATCTATATGAGTTTGATGTAAGCAACAACCAATTGTCTGGTCCATTTCCTATGTCTGTTCTAGGAATGGAAACTTTATCATTCTTGGATATAAGGTTTAATTTATTTTCTGGGGGAGTTCCACCACAAATATTCACACAAAACCTTGAAGTACTTTTCATAAACAACAATATCTTCACTCAAACGTTGCCTGATAACTTAGGCAATACTCATATTCTCTTACTCACCTTAGCAAACAACAAATTCAATGGTCCAATACCAAGAACCCTTCCAAAAGCTTTGTCCACTCTCACTGAGGTTTTGTTACTAAACAACCAATTAACAGGTTGTTTGCCTTATGAGATTGGTTTTCTTGAAGAGGCAAAAGTGTTTGATGCTGGAAACAATGAACTAACAGGTCCTTTACCATTCTCATTGAGTTGCCTTGAGAAAGTGGAGTTTCTCAATTTGGCTGGTAATCTATTATATGGCATGGTGCCAGAAGTGGTGTGTGCAGGGTTGGTCAATTTGGTCAATTTTTCATTATCAGATAACTATTTTACCCATGTGGGACCCTTTTGTAGGATCTTGATTCAGAGAGGAGTTCTTGATGTTAGAAACAATTGCATTCCTGATCTTCCATTTCAGAGATCAGTGATTGAGTGTGCAACTTTCTTTGCACGCCCAAGAATATGTCCTTTCATGTGGTCTTATGGTTTTATCCCTTGTAAGCTTCCTTCAATTCCTTAG 1236 0.3867 MSSTTSIFMVSTLYILLLSLPDHMSAHYIIGHSGQRSKGGGGGGDGKKSPHILAAPASPLNTETLVFKDQRLQVVYPVIQKFKSIITSDPLGVTKSWIGSDICSYKGFYCDTPPDNSSAIALASIDFNGFQLGASTLDGFIDNLPDIALFHANSNNFTGTISSQIAKLPYLYEFDVSNNQLSGPFPMSVLGMETLSFLDIRFNLFSGGVPPQIFTQNLEVLFINNNIFTQTLPDNLGNTHILLLTLANNKFNGPIPRTLPKALSTLTEVLLLNNQLTGCLPYEIGFLEEAKVFDAGNNELTGPLPFSLSCLEKVEFLNLAGNLLYGMVPEVVCAGLVNLVNFSLSDNYFTHVGPFCRILIQRGVLDVRNNCIPDLPFQRSVIECATFFARPRICPFMWSYGFIPCKLPSIP* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1661 411 Gene3D Ribonuclease Inhibitor 77 242 IPR032675 -
Lan6g1661 411 Gene3D Ribonuclease Inhibitor 244 381 IPR032675 -
Lan6g1661 411 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 44 409 - -
Lan6g1661 411 SUPERFAMILY L domain-like 80 372 - -
Lan6g1661 411 PANTHER BNAA09G53810D PROTEIN 44 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1661 Lan-Chr6 26263947 26265482 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1661 64 393 Leucine-rich Repeat extension Gene Families AT3G24480 42.727 2.39e-85 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1661 - - gmx:100789584 642.884