Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1650 ATGAGGGAAGAAGATTCTAACTGGTTTTCAAGATGGGAAGAGGAACTACCCTCCCAAGAGGAACTTATGCCCTTATCTCAAACCCTAATAACCCCTGATCTTGCCATAGCCTTTGATATCACTACAAATAACAACAACAACATCATTATTCAACAACAGCAAAATCTTCAACTTCAACCACAACAACAACAACAAAGTCTTCATCTTTTGCAGCAACAAATTCCTACAACACCTTCAAACCCCACTACCCAACAGCAACAACCCTCCTCCGGCGACTTTGCTGACTCCGGCGAGTTGGGATCAGCCAACGGCGCTGATGAGCCTGCCCGGACACTCAAGCGTCCGCGCCTCGTGTGGACGCCGCAGCTCCACAAGCGATTCGTGGACGCCGTGGCGCATCTCGGCATCAAGAACGCTGTCCCGAAGACTATAATGCAGCTCATGAGCGTCGATGGGTTAACCCGAGAGAACGTCGCGAGCCACCTGCAGAAATACCGCCTTTATCTCAAGCGAATGCAGGGGCTTTCCGGTGGTGGCTCCGGTGGTGGCGGCGGTGTTGATGCGGCTACTGATCACTTATTCGCCAGCTCGCCTGTGCCGCCGCATTTCTTGCAGCAGGGGAGGACTAATTCGGATCATTTCTTGCCATTTGTGCAGGTCCCTGCCCTTCAACACCACCACCAGATGGCGGCTGCAACAGCTGTGCAGCATCCTCAGCTGCAGCAGCCGCAGTATCACAGGCAGGTGGGGCATTTCGGGTCACCACCAAATGGGCACTTCGAGCATCCTTTCCTGTCTAGGCAGCCTCAACAGCAGCTTCACAGAATGGGAGCACCAGTGCACAGCCCAGTGGCTGGTTATGTTGAGGACAAGGAATCGGAGAATGCGTCAGGAGGAAGAAAGGTTCTTACTCTTTTTCCAACTGGAGATGATTGA 936 0.5278 MREEDSNWFSRWEEELPSQEELMPLSQTLITPDLAIAFDITTNNNNNIIIQQQQNLQLQPQQQQQSLHLLQQQIPTTPSNPTTQQQQPSSGDFADSGELGSANGADEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGSGGGGGVDAATDHLFASSPVPPHFLQQGRTNSDHFLPFVQVPALQHHHQMAAATAVQHPQLQQPQYHRQVGHFGSPPNGHFEHPFLSRQPQQQLHRMGAPVHSPVAGYVEDKESENASGGRKVLTLFPTGDD* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1650 311 Gene3D - 111 173 - -
Lan6g1650 311 Pfam Myb-like DNA-binding domain 118 166 IPR001005 -
Lan6g1650 311 MobiDBLite consensus disorder prediction 74 96 - -
Lan6g1650 311 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 311 IPR044841 GO:0003700|GO:0006355
Lan6g1650 311 MobiDBLite consensus disorder prediction 74 113 - -
Lan6g1650 311 PANTHER HOMEODOMAIN-LIKE PROTEIN-RELATED 1 311 - -
Lan6g1650 311 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 115 167 IPR006447 GO:0003677
Lan6g1650 311 MobiDBLite consensus disorder prediction 290 311 - -
Lan6g1650 311 SUPERFAMILY Homeodomain-like 111 171 IPR009057 -
Lan6g1650 311 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 119 170 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1650 Lan-Chr6 26068037 26070291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1650 1 311 G2-like Transcription Factor Family AT3G10760 59.026 8.27e-100 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lan6g1650 Myb_DNA-binding 2.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1650 - - jre:108983410 412.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0833 10 12200578 12202425 Lan6g1650 6 26068037 26070291 LSH
Lan6g1650 6 26068037 26070291 Lan3g0616 3 7557663 7560147 LSH