Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1641 ATGGAACACAGTTTCGGTCAACATTCAGTTCCTGTGCCTGGGTCCTTTGATAAGTCTAGGGTTTTGAATATTAAGCCAATTAGAACCCTTGTTCCTGTGTTCCCTTCACCATCTAATCCGTCGTCATTGTCAAACCCACATGGTGGTGCTCCTTTTGTTTGTGTTTCTCCTTCTGGTCCTTACCCTGCTGGTGTTGCACCCCTTTACCCGTTCTTCGTCTCGCCGGAGTCTCAGAGGCTGTCTGAACAAAATGCACAAACACCAGGTGGTCGGCATGTGCCTACAGGCCCGATATCTAATGCGGTTCCAATTAATTCGTTTAGGACACCGACCAGGGACACAAATGGAGATGTTGGCTCATCGCGGGGGAAGAACAAAAATGGTGGACAGTTCACGGAAGAAGATGGTTATGTTGAGATGAATGAAGTTGATGCAGATGATGGAACTGGGGATGGGAGCCGTAAGCGCAAGTCGGGGAGGCAGGGAAGAAGGCCTAAGGGTGCTGGTGGTGCATCATCTAATGCTAATCCTGAAGCAGTGGCTAATGATATTTTCAAATCAATTAACCCCTTAGTTTTCGATGCACTAAGTCAGCCTGATGGTTCCAGAGACTCAGTTACATATACCCTTTTGGTATATGAAGTGCTAAAAAGAAAGCTCGGACAATTAGAAGAGACAGCAAAGGATATTGCTGGGGCAAAACGGCCTGATTTAAAGGCAGGTGCACTTATGCTGACTAAAGGGATTCGAGCAAATAGCAAGAAAAGTTTTGGAGCTGTGTCTGGTGTTGAAGTTGGGGACATTTTCTATTTTAGAATTGAGTTATGCTTAGTGGGATTACATGCTCCTTCTATGGCCGGAATTGATTACATTGGTACCAAAACTAGTCAAGAGGAAGAGCCATTAGCTGTCAGTATTGTCTCATCTGGAGGATATGAAGATAATGTGGAGGATGGCGATGTGCTGATTTACACTGGCCAAGGTGGGGCTAACAAAGAAAAGGGGGCAAGTGATCAAAAACTCGAAAGAGGCAATCTTGCATTGGAAAAGAGCATGCACCGAGGTAATGATGTCAGAGTGATGAGGGGTTTGACCGATTTAGCACATCCAACTGGGAAGGTGTATATCTATGACGGTCTTTACAAGATCCAGAACACTTGGGTGGAGAAAGCAAAAAATGGTTTCAATGTGTTCAAGTATAAGTTAGTCAGGTGTCCTGGGCAGCCTGCAGCGTATATGATATGGAAATCCATTCAACAATGGACCGAGAAAAAAGTTCCAAGAACAGGGGTTATATTGCCTGATCTTACGTCATCAGCAGAAAAAATACCCGTTTGTCTCGTGAATGATGTTGACAATGAAAAGGGCCCTGCATATTTCACTTACTCCCCGACTCTGAAGAACTTGAAGCCAACAGCTCCTATGGAATCTTCTGGTGGGTGTTCTTGTATTGGTGGATGCCAACCTGGAAATCATAACTGCCCTTGCATGCAAAAGAATGGAGGGTATCTTCCATACTCTGCAATGGGGATACTTGCGGACCTAAAATCTGTGGTATACGAGTGTGGCCCTTCCTGTCAGTGCCCTCCTACTTGCCGAAATCGAGTTTCACAAGGTGGCTTGAAAATTCGTTTGGAGGTGTTCAGAACCAATGATAAGGGCTGGGGTCTAAGATCTTGGGATCCTATTCGTGCAGGAACTTTCATATGTGAGTATGCTGGAGAAGTCATAGATAATGCTAGAGTAGAAGAGCTTGTTGGTGAAAATGAAGATGATTACATTTTTGATTCTACTCGCATTTATCAGCAACTGGATATTTTTCCTAGCGATACTGAAGCTCCGAAGATTCCATCCCCCCTTTATATAACAGCAAAAAATGAAGGGAATGTTGCCCGGTTTATGAATCACAGCTGCTCTCCGAATGTGCTCTGGCGTCCAGTCGTACGTGAAAATAAGAATGAATCCGATCTCCATGTCGCCTTCTATGCAATTAGACATATCCCTCCAATGACGGAGTTAACTTATGATTATGGGACAGTTCTTTCTCTGAAAGCAGGACAGAAGAAAAAGAAATGCTCTTGTGGATCTGTGAAATGCAGGGATTACTTTTGTTAA 2115 0.4426 MEHSFGQHSVPVPGSFDKSRVLNIKPIRTLVPVFPSPSNPSSLSNPHGGAPFVCVSPSGPYPAGVAPLYPFFVSPESQRLSEQNAQTPGGRHVPTGPISNAVPINSFRTPTRDTNGDVGSSRGKNKNGGQFTEEDGYVEMNEVDADDGTGDGSRKRKSGRQGRRPKGAGGASSNANPEAVANDIFKSINPLVFDALSQPDGSRDSVTYTLLVYEVLKRKLGQLEETAKDIAGAKRPDLKAGALMLTKGIRANSKKSFGAVSGVEVGDIFYFRIELCLVGLHAPSMAGIDYIGTKTSQEEEPLAVSIVSSGGYEDNVEDGDVLIYTGQGGANKEKGASDQKLERGNLALEKSMHRGNDVRVMRGLTDLAHPTGKVYIYDGLYKIQNTWVEKAKNGFNVFKYKLVRCPGQPAAYMIWKSIQQWTEKKVPRTGVILPDLTSSAEKIPVCLVNDVDNEKGPAYFTYSPTLKNLKPTAPMESSGGCSCIGGCQPGNHNCPCMQKNGGYLPYSAMGILADLKSVVYECGPSCQCPPTCRNRVSQGGLKIRLEVFRTNDKGWGLRSWDPIRAGTFICEYAGEVIDNARVEELVGENEDDYIFDSTRIYQQLDIFPSDTEAPKIPSPLYITAKNEGNVARFMNHSCSPNVLWRPVVRENKNESDLHVAFYAIRHIPPMTELTYDYGTVLSLKAGQKKKKCSCGSVKCRDYFC* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1641 704 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 12 703 - -
Lan6g1641 704 Gene3D SET domain 427 703 IPR046341 -
Lan6g1641 704 SMART preset_2 433 527 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lan6g1641 704 Gene3D - 241 426 IPR036987 -
Lan6g1641 704 MobiDBLite consensus disorder prediction 99 127 - -
Lan6g1641 704 ProSiteProfiles YDG domain profile. 258 404 IPR003105 -
Lan6g1641 704 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 12 703 - -
Lan6g1641 704 Pfam Pre-SET motif 438 535 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lan6g1641 704 ProSiteProfiles Pre-SET domain profile. 479 540 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lan6g1641 704 MobiDBLite consensus disorder prediction 79 177 - -
Lan6g1641 704 ProSiteProfiles Post-SET domain profile. 688 704 IPR003616 -
Lan6g1641 704 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 120 703 IPR025794 GO:0016571
Lan6g1641 704 SUPERFAMILY SET domain 419 684 IPR046341 -
Lan6g1641 704 SUPERFAMILY PUA domain-like 241 423 IPR015947 -
Lan6g1641 704 SMART set_7 543 684 IPR001214 GO:0005515
Lan6g1641 704 Pfam SET domain 554 678 IPR001214 GO:0005515
Lan6g1641 704 Pfam SAD/SRA domain 257 408 IPR003105 -
Lan6g1641 704 ProSiteProfiles SET domain profile. 543 678 IPR001214 GO:0005515
Lan6g1641 704 SMART G9a_1 253 408 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1641 Lan-Chr6 25603579 25607463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1641 6 703 Su(var)3-9 homologs AT1G73100 47.141 0.0 607
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lan6g1641 SAD_SRA 1.9e-50 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1641 K24405 - gmx:100786650 1107.43