Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1633 ATGAACTCCGGTGAAGAAAATTCCAGTTTTGAGCTCCGGCAAAGAGATTCAGGCGACGCGGAACACGATTCCGGCGATCCGATTCGGTTCGGGCCGCGGCCCAATTCTTCCGCGGTATATGCCGGCGTCGGCGCTAGGTACAAGTTAATGTCTCCGGCGAAGCTTCCGATAACGAGGCCACCGTGTTTATCTGTTCCGCCGATGCTCAGTCCGACGTCGTTTCTAGAGTCCCCGGTTCTTCTCTCCAATATGAAGGTGGAGCCTTCACCAACTACAGGATCCCTTCCTAAGCTTCATCAAACAGCACATGGTTCTGTGACTTATGCTGTTGATGACAGAAAAGCCAGCTTCTTTGAGTTCAAACCAGACAGTAGATCAAACATGGGTCCTACTGACTTTGGTAACCATGTAAGTGAAAAATCAACTCAAATAGAAGGCCAAGGAAAAGTTCAATCTTCAAACTCACCTCTGTTAGTCAAAAATGAGATAGCAGTCCCTTCAAATGAATTAAGTCTATCATCACCAGGGACTAGTTCTCATATTGAAGTCGATTTGGAAGAATTCAACAACTGGAGCAACACATGCACTGGGCTTCAAGCATCACAAATTGAGGGTAGGGGCACTGGACTTTCAGTTACAGCTGAGAGAGTATCTGATGATGGATACAATTGGAGAAAATATGGGCAGAAACATGTTAAAGGAAGTCAATTTCCGCGGAGTTATTACAAATGTACACATCCTAACTGTGAAGTGAAGAAACTATTTGAACGCTCCCATGATGGGAAAATCACTGAAATAGTGTACAAGGGAATGCATGATCATCCTAAACCTCAACCAAGTCGCCGATACCCTGCTGGAACTACTATGTCTATACATGAAGAGAGATGTGACAAGGCTTCTTGTTTAATTGGCCGAGATGAGAAAGCATCTGGCCACATGTCTCACACTGCTGAACCCAACAGTACTTCGGAGCTATCACCTGTAGCAACAAATGATGACAGTCCAGAGGTTGCAGGGTTTGTGTCAAACCGCATTAATGATGAGGTTGATGATGACGATCCCTTCTCAAAGAGAAGAAAAATGGCTCTCGGAAATACTGACATCACTCCGGTCATTAAGCCAATCCGGGAGCCACGGGTTGTTGTTCAAACCCTGAGTGAGGTTGATATATTGGATGATGGGTACCGCTGGCGTAAGTATGGGCAGAAGGTGGTGAGAGGCAATCCTAACCCCAGGAGTTATTACAAATGCACAAATGCTGGTTGCCCTGTTAGAAAACACGTGGAGAGGGCGTCTCATGATCCGAAAGCCGTGATAACCACATATGAGGGCAAACACAATCATGATGTACCGGCTGCAAAAAATAGTAACCATGACATGGCAGGACCATCTGGTGCAGGTGGACAGGCAAGATTTAGGCCAGAAGAAAGTGATACTATTAGCCTTGACCTTGGGATGGGCATTAGCACAGCGTCTGAAATTAGATCGAACGGGCAAGGGAGATTGGTGCTTTCTGAATTTGGGAACAGTCAAACTCACACCGGCAATTCCAATTTCAAGTTTGTTCATACTGCCGAAGCTCCAGTGTACCTTGGTGTCCTAAATAACAGCTCAAATCCGTATGGCTCAAGAGAAAGTTTGAGTGATAATCATTCTGCTTATCCTTGCCCGCAAAACAGTGGAAGAATACTAACTGGTCCATAA 1704 0.4566 MNSGEENSSFELRQRDSGDAEHDSGDPIRFGPRPNSSAVYAGVGARYKLMSPAKLPITRPPCLSVPPMLSPTSFLESPVLLSNMKVEPSPTTGSLPKLHQTAHGSVTYAVDDRKASFFEFKPDSRSNMGPTDFGNHVSEKSTQIEGQGKVQSSNSPLLVKNEIAVPSNELSLSSPGTSSHIEVDLEEFNNWSNTCTGLQASQIEGRGTGLSVTAERVSDDGYNWRKYGQKHVKGSQFPRSYYKCTHPNCEVKKLFERSHDGKITEIVYKGMHDHPKPQPSRRYPAGTTMSIHEERCDKASCLIGRDEKASGHMSHTAEPNSTSELSPVATNDDSPEVAGFVSNRINDEVDDDDPFSKRRKMALGNTDITPVIKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPAAKNSNHDMAGPSGAGGQARFRPEESDTISLDLGMGISTASEIRSNGQGRLVLSEFGNSQTHTGNSNFKFVHTAEAPVYLGVLNNSSNPYGSRESLSDNHSAYPCPQNSGRILTGP* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1633 567 SUPERFAMILY WRKY DNA-binding domain 383 451 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan6g1633 567 MobiDBLite consensus disorder prediction 1 35 - -
Lan6g1633 567 MobiDBLite consensus disorder prediction 308 358 - -
Lan6g1633 567 MobiDBLite consensus disorder prediction 9 28 - -
Lan6g1633 567 MobiDBLite consensus disorder prediction 452 474 - -
Lan6g1633 567 Pfam WRKY DNA -binding domain 219 275 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan6g1633 567 Pfam WRKY DNA -binding domain 392 448 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan6g1633 567 SMART WRKY_cls 218 276 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan6g1633 567 SMART WRKY_cls 391 450 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan6g1633 567 ProSiteProfiles WRKY domain profile. 213 277 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan6g1633 567 SUPERFAMILY WRKY DNA-binding domain 215 277 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan6g1633 567 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 36 550 IPR044810 GO:0003700
Lan6g1633 567 MobiDBLite consensus disorder prediction 314 330 - -
Lan6g1633 567 MobiDBLite consensus disorder prediction 121 153 - -
Lan6g1633 567 MobiDBLite consensus disorder prediction 541 567 - -
Lan6g1633 567 ProSiteProfiles WRKY domain profile. 386 451 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan6g1633 567 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 36 550 - -
Lan6g1633 567 Gene3D WRKY domain 376 452 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan6g1633 567 Gene3D WRKY domain 210 278 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan6g1633 567 MobiDBLite consensus disorder prediction 128 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1633 Lan-Chr6 25139134 25146254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1633 50 567 WRKY Transcription Factor Family AT4G26640 54.113 2.13e-177 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan6g1633 WRKY 1.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1633 - - adu:107464084 833.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1633 6 25139134 25146254 Lan2g1346 2 24203334 24210658 LSH
Lan6g1633 6 25139134 25146254 Lan2g1346 2 24203334 24210658 PCT
Lan6g1633 6 25139134 25146254 Lan11g0045 11 280972 285047 PCT
Lan2g1346 2 24203334 24210658 Lan6g1633 6 25139134 25146254 PCT
Lan11g0045 11 280972 285047 Lan6g1633 6 25139134 25146254 PCT