Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1622 ATGGGAACCTGCATTGAAAATTTTGTACAAGGTGAGGAGGATGAGCATATCTTTTGTAGCAAATATTCACCGGTCCCGGTTCCTGATAATGTGACATTGCCAGAATTTGTGTTGCAACATGCTGAATTATATGCTGATAAGGTTGCGTTTGTGGATGCTGTGACTGATAAAAGAATTACTCATGGTGAGGTGGTGAGGGACACGCACCGATTTTCCAAGGCCTTAAGTTCTCTCGGTCTGAGGAAGGGGCATGTTGTCATTGTAGTGCTTCCTAATGTGATAGAGTATGGCATTGTTGCTTTGGGGATAATGGCTGCTGGTGGAGTGTTTTCAGGGGCAAACCCAGCATCTCATATATCAGAAATTAAGAAACAAGCAGAGTCTGCTGATGCCAAATTAATTGTCACAAATAGTGAAAACTATGAAAAGTTGAAAGCTCTAGAGATACCTGTAATTGTGCTAGCCAATGAACTTGTTGAAGGTGCTATGAATTGGAACAAATTGCTTGAAGCAGCAGAAAATGCAGGGGATGTAATAAGGGAACCTATTCAGCAGAATGATCTTTGTGCCATGCCATTCTCATCAGGCACCACAGGAGTGGCAAAGGGTGTGATGCTTACTCATAGAAACCTTGTAGCCAATCTTTGCTCTACGCTCTTCGGCGTAGGGCCGGAAATGATTGGTCAGGTCACAACATTAGGCTTAATTCCCTTCTTTCACATTTATGGCACCACTGGAATATGTTGTGCTACTATTAGGAACAAAGGGAAAGTTGTGGTGATGGGAAGATTCGAGCTGAAAACATTTCTGAATGCCTTGATCGCGCACGAGGTCACATTTGCGCCGATTGTGCCCCCAATCATTCTCAGCTTGGTGAAAAATCCAATAGTGGATGAATTCGATCTGCGCAAGCTTAAACTCCAGGCCGTTATGACTGCAGCAGCACCACTTGCACCAGAACTCCTTACTGCCTTTGAACACAAGTTCCCTGGTGTTCTTGTCCAAGAGGCATATGGACTAACTGAGCACAGTTGCATCACACTTACTCATGCACAAAAAGGATTAGTAAGTCCACAAAAAAACTCAGTAGGGTTCATCCTCCCAAACCTAGAAGTCAAGTTTATTGATCCTGATACTGGTAGATCCCTCCCAAGGAACAAACCTGGGGAACTCTGTGTAAGAAGCCAATGTGTTATGCAAGGTTACTATAAACAGGTTGATGAGACTGCCCAAACCATTGACAAGAATGGATGGCTTCACACTGGTGACGTAGGATTCATAGATGATGAAGAAAATGTGTTTATTGTGGATCGTATCAAGGAGTTGATTAAATACAAAGGTTTCCAAGTTGCTCCTGCTGAGTTAGAGGCCATTTTGCTGTCTCATTCCTCTGTTGAAGATGCAGCTGTTGTGCCATTACCAAATGAAGAAGCAGGGGAAATCCCAGCTGCAAGTGTTGTTTTGAGCCAAGGTGCTAAAGAGAATGAAGAGGACATTATGAACTATGTTGCATCAAATGTTGCAAGTTACAAGAAAGTAAGAGTGGTGCACTTTGTTGAAGCCATACCAAAATCACCTTCAGGAAAAATAATGAGAAGGCTCATCAAAGAGAGGATGGTGGAAAAGATTAAGGCAAATTCCAATAATTTCTGA 1653 0.4271 MGTCIENFVQGEEDEHIFCSKYSPVPVPDNVTLPEFVLQHAELYADKVAFVDAVTDKRITHGEVVRDTHRFSKALSSLGLRKGHVVIVVLPNVIEYGIVALGIMAAGGVFSGANPASHISEIKKQAESADAKLIVTNSENYEKLKALEIPVIVLANELVEGAMNWNKLLEAAENAGDVIREPIQQNDLCAMPFSSGTTGVAKGVMLTHRNLVANLCSTLFGVGPEMIGQVTTLGLIPFFHIYGTTGICCATIRNKGKVVVMGRFELKTFLNALIAHEVTFAPIVPPIILSLVKNPIVDEFDLRKLKLQAVMTAAAPLAPELLTAFEHKFPGVLVQEAYGLTEHSCITLTHAQKGLVSPQKNSVGFILPNLEVKFIDPDTGRSLPRNKPGELCVRSQCVMQGYYKQVDETAQTIDKNGWLHTGDVGFIDDEENVFIVDRIKELIKYKGFQVAPAELEAILLSHSSVEDAAVVPLPNEEAGEIPAASVVLSQGAKENEEDIMNYVASNVASYKKVRVVHFVEAIPKSPSGKIMRRLIKERMVEKIKANSNNF* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1622 550 Gene3D - 15 440 IPR042099 -
Lan6g1622 550 Gene3D - 441 544 IPR045851 -
Lan6g1622 550 Pfam AMP-binding enzyme C-terminal domain 454 529 IPR025110 -
Lan6g1622 550 CDD 4CL 27 533 - -
Lan6g1622 550 ProSitePatterns Putative AMP-binding domain signature. 191 202 IPR020845 -
Lan6g1622 550 Pfam AMP-binding enzyme 39 445 IPR000873 -
Lan6g1622 550 PANTHER 4-COUMARATE--COA LIGASE-LIKE 1 9 542 - -
Lan6g1622 550 SUPERFAMILY Acetyl-CoA synthetase-like 20 542 - -
Lan6g1622 550 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 9 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1622 Lan-Chr6 24437310 24440247 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1622 12 540 Monolignol Biosynthesis Gene Families AT1G62940 72.693 0.0 786
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1622 K01904 - gmx:100814237 933.324