Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1600 ATGCCTAGAAGCTTAAGAAACCTGTTACTTTATTCCAAAATCTTCTCCTTCACACTGCTTTTATCATTAACCTCTCTTCTCTTCACATGTTGTTACTCACTTAATGAACAAGGTCAAGCTCTAGTAGCATGGAAAAATAGTTTAAACAGCACTCAAGATGCATTAGAATCATGGAATCCTTTAGCTCCAAGCCCATGCAACTGGTTTGGTGTGCATTGCAACTCACAAGGATATGTCGTGGAGATAAACCTTAAGTCAGTGAACTTGGAAGGTTCATTTTCATTACCTTTATATTCTCAATCTCTTATGTGGTCCTTGAAGATTCTTATCCTCTCATCAACCAACATCACAGGCAAGATTCCAAGAGAGATTGGAGACTATAAAGAACTCATCTTTATTGATCTTAGTGGTAATTCTCTCACAGGTGAAATCCCTGAAGATATTTGCAGGCTAAGAAAGCTGCAAAGTTTGTCTCTCCATACAAACTTCATTGAAGGCAATGTTCCATCAAATATTGGAAATCTATCAAGTCTAGTGAACTTGACACTCTATGACAATAAAATCAGTGGTGAAATCCCAAAGAGTATTGGCTCCTTAAGCAAGCTTCAAGTGTTCAGAGCTGGTGGCAATAAGAACCTTGAGGGTGAGCTACCATGGGAAATTGGAAACTGCACCAACTTGGTCATATTAGGCCTTGCCGAAACCAGCATTTCGGGGAGTCTTCCTTCTTCAATTGGAATGCTGAAAAGAATTCACACCATAGCCATTTACACAACTCTATTGTCAGGCCCTATTCCAGAAGAGATTGGCAATTGCAGTGAGTTGCAGAACCTGTACTTGTACCAGAACTCTATATCAGGTTCAATTCCAATCCAAATTGGAGAACTTGGCAAGCTTAAGAGTCTACTTTTATGGCAAAACAATATAGTTGGTACAATCCCTGAAGAGCTTGGAAGCTGCAGAGAGATTAAAGTCATAGACTTATCCGAAAATCTCCTTACAGGAAGCATACCAAGGAGTTTTGGTCATCTTCCAAATTTGAGAGAACTTCAATTGAGTGCCAATCAGCTCTCAGGTACTATACCTCCTGAAATTACAAAGTGCACTTCACTGACTCAACTGGAACTTGACAACAATTCTCTAACTGGCGAAATTCCTGATCTTATTGGTAACTTGAGAAGCTTGAATTTGTTCTTTGCTTGGCAGAACAATCTAACAGGAAAAATTCCTGATAGCCTTTCGGAGTGCCAAGAACTTCAGGCACTTGATCTCTCTTACAACAACTTGATTGGTCCAATACCCAAGCAACTATTCGGGTTGAGGAATCTCACCAAACTTCTCCTTCTTTCAAATGATTTATCAGGCTTCATACCACCTGATATAGGTAACTGCACGAGTCTCTACCGGCTGCGTTTGGATCACAATAGACTAGAAGGTAACATTCCACCCGAGATAGGAAACTTGAAGAATTTGAATTTTGTTGATATGAGCAGCAATCATCTTATAGGGGAGATTCCTGCAGCACTGTCTGGCTGCCAGAATCTTGAGTTTTTAGACCTTCATTTGAATAGTCTAACCGGTTTGGTTCCGGATTCTCTTCCAGAAAGCCTGAAGTTAATTGACTTCTCAAACAACAGGCTAACCGGTCCATTGAGTCCTAAAATTGGTGCATTGGTTGAGTTAACGAAACTCAACCTCGGAAAGAATCAACTCAGCGGTAGAATCCCAGCAGAGATCCTATCCTGCACTAAGCTACAACTTCTAGATTTAGGAAGGAATAGTTTCTCTGGAGAAATACCAAAGGAGGTTGGTCTAATTCCTTCACTAGAAATCTCTCTCAATCTTAGCTGCAACCAGTTTTCTGGTCAAATTCCAAACCGATTCTCTAGTCTTACCAAACTTGGAGTCCTTGATCTTTCACACAACAAGCTCTCAGGGAATTTAGATTCTCTCTCTGACCTTGAGAATCTTGTTTCCTTAAATGTTTCATTCAATGGCTTCTCCGGTGAGTTGCCTAACACGCCATTTTTCCGTAAACTACCTCTCAGTGACCTTGCTGAAAATCAAGGTCTCTACATTGCTGGTGGTCTTGAAACTCATGCTAACAGAATGGGATCTAAAGATCATGCTAGGTCAGCTATGAAGTTCACAATGTCCATTCTCTTAAGCACCGGCGCAGTACTAGTGCTGCTCGCGATCTATCTCTTCATTCGCGCTCATATCTCCAACAAAGTACTAATGGAAAATGAGGGTTGGGAAATAACTTTGTATCAGAAATTTGAATTGTCCATTGATGACATTGTCCTGAATTTTACATCAGCCAATGTGGTTGGCACAGGAAGCTCTGGAGTAGTGTACAAGGTAACAACTCCGAACAGAAAAACACTAGCCGTAAAAAAGATGTGGTCATCAGAAGAGTCTGGAGCATTCGATTCTGAGATTCAAACACTTGGCTCAATCCGGCACAAGAATATCATCAGGCTGCTAGGTTGGGGATCAAATAGGAACTTGAAGCTGCTGTTTTATGACTACCTCCCTAATGGAAGCCTGAGCTCATTACTTCACGGCTCGGGAAAGGGGAAAGCAGAATGGGAGACAAGATATGAAGTTATCTTAGGTGTGGCTCATGCACTTTCTTATTTGCACCATGATTGTTTGCCAACTATAATGCATGGCGATGTCAAAGCGATGAATGTCTTATTAGGACCTGGCTATCAACCATACCTTGCCGACTTTGGCCTGGCGAGAATCGCAAGGGAAAACGATCACAATACTAATTCCAATCCAGTTCAAAGACATTACCTTGCTGGTTCATATGGATACATGGCTCCTGAGCATGCATCTATGCAGCCTATAACTGAGAAAAGTGATGTGTATAGTTATGGTGTGGTTCTACTCGAGGTCCTGACCGGGCGGCACCCTTTAGACCCAACATTACCCGGGGGTGCACACTTGGTTCAGGGGGTCAGGAACCATTTAGCTAGCAAAGGAGAGCCATCTGACATTCTTGACCCAAAACTGAGAGGAAGGGCTGACCCTACAATGCATGAAATGCTACAAACTCTCGCAGTATCATTTTTATGTCTCAGCACCAGAGCCGACGACCGTCCCACGATGAAGGATATTGTTGCAATGCTCAAGGAAATTAAACCTATTGAATCCTCAAGGGAAAATGATGATGTGCTGAAGGGTGGTTTAACAGAACATAGTTCTCCACCACCTCAAAATAATGTAGTTTCACATGGATCTTCTAACTGTTCCTATAATTTCTCAGACGATTCAATCAGTTAA 3291 0.4166 MPRSLRNLLLYSKIFSFTLLLSLTSLLFTCCYSLNEQGQALVAWKNSLNSTQDALESWNPLAPSPCNWFGVHCNSQGYVVEINLKSVNLEGSFSLPLYSQSLMWSLKILILSSTNITGKIPREIGDYKELIFIDLSGNSLTGEIPEDICRLRKLQSLSLHTNFIEGNVPSNIGNLSSLVNLTLYDNKISGEIPKSIGSLSKLQVFRAGGNKNLEGELPWEIGNCTNLVILGLAETSISGSLPSSIGMLKRIHTIAIYTTLLSGPIPEEIGNCSELQNLYLYQNSISGSIPIQIGELGKLKSLLLWQNNIVGTIPEELGSCREIKVIDLSENLLTGSIPRSFGHLPNLRELQLSANQLSGTIPPEITKCTSLTQLELDNNSLTGEIPDLIGNLRSLNLFFAWQNNLTGKIPDSLSECQELQALDLSYNNLIGPIPKQLFGLRNLTKLLLLSNDLSGFIPPDIGNCTSLYRLRLDHNRLEGNIPPEIGNLKNLNFVDMSSNHLIGEIPAALSGCQNLEFLDLHLNSLTGLVPDSLPESLKLIDFSNNRLTGPLSPKIGALVELTKLNLGKNQLSGRIPAEILSCTKLQLLDLGRNSFSGEIPKEVGLIPSLEISLNLSCNQFSGQIPNRFSSLTKLGVLDLSHNKLSGNLDSLSDLENLVSLNVSFNGFSGELPNTPFFRKLPLSDLAENQGLYIAGGLETHANRMGSKDHARSAMKFTMSILLSTGAVLVLLAIYLFIRAHISNKVLMENEGWEITLYQKFELSIDDIVLNFTSANVVGTGSSGVVYKVTTPNRKTLAVKKMWSSEESGAFDSEIQTLGSIRHKNIIRLLGWGSNRNLKLLFYDYLPNGSLSSLLHGSGKGKAEWETRYEVILGVAHALSYLHHDCLPTIMHGDVKAMNVLLGPGYQPYLADFGLARIARENDHNTNSNPVQRHYLAGSYGYMAPEHASMQPITEKSDVYSYGVVLLEVLTGRHPLDPTLPGGAHLVQGVRNHLASKGEPSDILDPKLRGRADPTMHEMLQTLAVSFLCLSTRADDRPTMKDIVAMLKEIKPIESSRENDDVLKGGLTEHSSPPPQNNVVSHGSSNCSYNFSDDSIS* 1097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1600 1096 MobiDBLite consensus disorder prediction 1055 1096 - -
Lan6g1600 1096 Gene3D Ribonuclease Inhibitor 612 696 IPR032675 -
Lan6g1600 1096 Gene3D Ribonuclease Inhibitor 435 533 IPR032675 -
Lan6g1600 1096 Gene3D Ribonuclease Inhibitor 337 434 IPR032675 -
Lan6g1600 1096 MobiDBLite consensus disorder prediction 1069 1096 - -
Lan6g1600 1096 SUPERFAMILY Protein kinase-like (PK-like) 767 1046 IPR011009 -
Lan6g1600 1096 SUPERFAMILY RNI-like 293 659 - -
Lan6g1600 1096 ProSitePatterns Serine/Threonine protein kinases active-site signature. 889 901 IPR008271 GO:0004672|GO:0006468
Lan6g1600 1096 Pfam Leucine rich repeat N-terminal domain 35 74 IPR013210 -
Lan6g1600 1096 Pfam Protein kinase domain 773 1043 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1600 1096 Pfam Leucine rich repeat 298 357 IPR001611 GO:0005515
Lan6g1600 1096 SMART serkin_6 771 1050 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1600 1096 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 4 1062 - -
Lan6g1600 1096 PRINTS Leucine-rich repeat signature 419 432 - -
Lan6g1600 1096 PRINTS Leucine-rich repeat signature 631 644 - -
Lan6g1600 1096 ProSiteProfiles Protein kinase domain profile. 771 1049 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1600 1096 SUPERFAMILY L domain-like 55 395 - -
Lan6g1600 1096 ProSitePatterns Protein kinases ATP-binding region signature. 777 800 IPR017441 GO:0005524
Lan6g1600 1096 Gene3D Ribonuclease Inhibitor 31 100 IPR032675 -
Lan6g1600 1096 Gene3D Ribonuclease Inhibitor 101 336 IPR032675 -
Lan6g1600 1096 Gene3D Phosphorylase Kinase; domain 1 739 844 - -
Lan6g1600 1096 Gene3D Ribonuclease Inhibitor 534 611 IPR032675 -
Lan6g1600 1096 ProSiteProfiles Leucine-rich repeat profile. 633 655 IPR001611 GO:0005515
Lan6g1600 1096 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 4 1062 - -
Lan6g1600 1096 SMART LRR_typ_2 296 320 IPR003591 -
Lan6g1600 1096 SMART LRR_typ_2 344 368 IPR003591 -
Lan6g1600 1096 SMART LRR_typ_2 558 582 IPR003591 -
Lan6g1600 1096 SMART LRR_typ_2 631 654 IPR003591 -
Lan6g1600 1096 SMART LRR_typ_2 151 175 IPR003591 -
Lan6g1600 1096 SMART LRR_typ_2 440 464 IPR003591 -
Lan6g1600 1096 SMART LRR_typ_2 488 512 IPR003591 -
Lan6g1600 1096 Gene3D Transferase(Phosphotransferase) domain 1 845 1065 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1600 Lan-Chr6 23770608 23779416 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1600 31 1095 Receptor kinase-like Gene Family AT5G56040 66.450 0.0 1406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan6g1600 Pkinase 1.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1600 - - gmx:100792943 1778.45