Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1591 ATGGCTACCATTGCCACCATCTTCAACAACTTCCTCTCTCTTCTCCTTCTCCAACTTGGTTGCTTTATCTTCACCACCAAACAAGAACACTCATCATTAAAGAAACGCAAAATCTCACCTTTATTTAAAACCCATAAAGCCCTTTCTTCTTCTTGGCATTTCATCAAACATCTTTTGTCCATAAAATCTACGAAGACCACAAACACCACCCATTCATCACCGCAATCCGAATCCACCACCACTGTCAACACCACCGCCGCACAGTCTTTGAATTCCGGCAGGTTCTCCCAGGCACAACAAGAATTGGATTTCCCGGATCCTCAAAGCAGAAAAATAACTGGGTCTGGCTCCGAATCCGATATATCCGCCGATAACAACAACTTCTTCCCCCTCCGTAACGATATCTTTCCATGCACCGCGTGCGGCGAGATTTTCCAAAAGCCCAACCTTCTCGAACAACACCAAACCACCAAGCACGCTTTATCGGAACTTTCAGGATCCGACCCGGGTCATAACATTGTGCAGATCATATTCAAGTCGGGTTGGCCTCAGAATCGTAATCCCCCAAACATAACCCGGATTCTGAAGATCAACAACAGCCCCAAAATCCTTTCAAAATTTGAGGAGTACCGTGAAATAGTGAAGGCTAAGGCGGCGCGTGATTACACGCGCCGCCGTGACGAGCGGTGCGTAGCAGATGGCAACGAGCTCATGCGGTTTCACTGTTCCACGTTTCTTTGCGAGTTGGGACTCAACGGGGATTCTAAAATTTGTTTGCAACAATTTTGTAATATTTGTGGGATTATTAAATTGGGTTTTTCGTCTAAGCTGGATGGCATTTCCACGATGTCATCCAGCTGGAAGGCACACTTGTCAATTCCCAATGAAGTCGAGCAGGAGTTCCACTTCATGAATGTAAAGCGGGCCATGCTTGTTTGTCGGGTTATTGCAGGTTGGGTTGGATCAGACTTGGATGACGTGGATAAAGAGGATGGGGAGTTTGATTCCTTGGTGGCGCGTGGTGGGAGTGGAGTTAAATCCAGGCTTGATGAGGAGGAGCTATTAGTGTTTAATCCTAGGGCTGTGCTTCCTTGCTTTGTAATTGTCTACGGTGTATGA 1119 0.4656 MATIATIFNNFLSLLLLQLGCFIFTTKQEHSSLKKRKISPLFKTHKALSSSWHFIKHLLSIKSTKTTNTTHSSPQSESTTTVNTTAAQSLNSGRFSQAQQELDFPDPQSRKITGSGSESDISADNNNFFPLRNDIFPCTACGEIFQKPNLLEQHQTTKHALSELSGSDPGHNIVQIIFKSGWPQNRNPPNITRILKINNSPKILSKFEEYREIVKAKAARDYTRRRDERCVADGNELMRFHCSTFLCELGLNGDSKICLQQFCNICGIIKLGFSSKLDGISTMSSSWKAHLSIPNEVEQEFHFMNVKRAMLVCRVIAGWVGSDLDDVDKEDGEFDSLVARGGSGVKSRLDEEELLVFNPRAVLPCFVIVYGV* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1591 372 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 3 371 - -
Lan6g1591 372 ProSiteProfiles Zinc finger C2H2 type domain profile. 136 164 IPR013087 -
Lan6g1591 372 SUPERFAMILY ADP-ribosylation 161 371 - -
Lan6g1591 372 PANTHER NUCLEIC ACID BINDING PROTEIN 3 371 - -
Lan6g1591 372 ProSitePatterns Zinc finger C2H2 type domain signature. 138 159 IPR013087 -
Lan6g1591 372 MobiDBLite consensus disorder prediction 65 124 - -
Lan6g1591 372 Gene3D - 159 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1591 Lan-Chr6 23500400 23501877 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1591 52 372 C2H2 Transcription Factor Family AT2G29660 51.642 1.44e-98 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lan6g1591 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1591 - - gmx:100785244 498.819