Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1579 ATGACATCATCATCAACAATAACAAAAACAACAAAAAAAGTTTCCATAATTCTTGTTTTCTTCTTCACAACCATCCTCATCATAACCACCGCAGTCAACGCCTTTAGCTCCGCCTCAACCATCGCCGTCACCTACGGCACCGCCACCCTTTGCGCCATAGTTGCCGGCAAGCCTACCCAATACATCCAATGTTACCAAAACGGTAAACTCATTCCAGTAGAGCCCAAAGTTTCATTTCAAGCAATCTCCGGTGGCCGGAGCTTCTTCTGCGGCCTCAGGTCCGGTGGTTTCAGCCTCCAGTGTTGGGACACCAATGCGTTGAACACGGTTTTTCAACCAAAGAGGTTATTTCACAATGATGTAGTGCAGTTAACTGATATATCAGTTGGTGATACTCATGTTTGTGCAAGAGAGTTGCACTCTGGTGTAGCAAGGTGTTGGAGAGGTAGTAGTACTGATGAATTTCCTTCTCCCGGCGCGGCGATTCGGTTTCGAAGAATTACTTCTGGGTTTGGTTTTTCTTGTGGGATATTGGAGGAGAACAGGACAGTTTGGTGTTGGGGTGACAGAGGAAATGGTTATGGTGTTGAAATTCAAAGAAAGTTTGGGAATTTGACTATGTCAAGTTTGGTTGCTGGGGAGTCTCATGTTTGTGGATTAACTCTTAGTGGTGTTTTGGTTTGTAAAGGAAACAATGGTTCAGGTCAATTGAATGTTCCTCTCTCTTCACCTTCAGAGTTTTCATCAGGCCTTGTTTTAGGAGCAGATTTCACATGTGCTATTAGGAAAAGGAATGGACTTGTTGTGTGTTGGGGAGGTTCTAATAGGTTTGGTTTTGACACTCATGTGATTCAGAATGTTTCTTTTGAGTCAATTGTTGCTGGTTTGGATTTTGTTTGTGGTTTGACAACAAAAAAATTGTCTTTGATTTGTTGGGGTCATGGTTGGTCTAATAACCTTAACTTGCCTATTGATGTTCCATTAGGAATGGTTCTACCAGGTCCATGTGTTAAGGATTCTTGTAGTTCTTGTGGTACATTTCCGAATTCGGATGAGTTATGTCATGGTTCTGGAAGTATTTGCTATTCATGTATGGTTGAGGTTCCACTAGCTGTGCCATTGTTTCAATCACCATCACAAGTTCCCAAGAAACAATTTCCTTCAGCTAAAGAAAAAGGTATGAAGGAATTGTTGGCATTTCTGATTGTTGGATCAGTTGGTGCAATTTCAGGTTTATGCACTATTGTTTATTTCTTTTGGATTGGAGTTAGAAGATTCTTAAGGAGAAAAGTTGATAATTCTGTGAAACCTACAAGCGCTGAGTCTGATACATATGCAGATATAGTTCCCATGTCAAATCTTGACCATGATTTCTCTTCATTGAGATCTTTTTCTAGTAAAAGGCTTGGCTCAAGAAAAATGAGGAGAAATAGGAGTGGTTCATCATCAAAACATGTAGACAAAACTGAGAGTTTCTCATTATTTGCACTTGCCACTGCCACTAACAACTTTTCGGTATCTAATAAGATTGGTGCTGGTAGCTTTGGCAGTGTTTATAGAGGCAAGCTGGAAGATGGCCGCGACATGGCCGTAAAAAGAGGTGATTTCTGTACTAAGAAAAGGAAATTCCAGGATAAAGAAATGGCTTTTGATTCCGAATTGGCGCTGTTATCTCGGCTGCACCACAAGCATTTAGTAAAGCTAATTGGTTTCTGTGAGGAAAAGTATGAGAGGCTTTTGGTTTATGAGTACATGAGCAATGGTTCAATCCATGATCATTTGCATGACAAGAGTAACATTCATAAAAGTAGCAGCATTTTGAATTCTTGGAAGATGAGAATCAAAATAGCATTAGGTGCTGCTAGAGGAATTGAGTACATGCATAACTATGCAGTACCACCAATTATCCACAGAGATATAAAGTCCTCAAATATATTACTAGATTCAAATTGGAATGCTAGAGTTTCTGATTTTGGATTATCACTAATTTGGCCAGAAAATGAGCAAGAATTTGTATCAACTATAACCAATGCAGTTGGAACAGTAGGATACATAGACCCTGAGTACTATATATTGAATGTGTTAACCACAAAAAGTGATGTTTATGGTTTAGGTGTGGTGTTGTTAGAACTTCTAACAGGAAAAAGAGCTGTGTTTAAAACTGAAGATGGGTCTAGTCCTATAGGGGTAGTGGAATATGCAGTGCCAAATATAGGTTCAGGAGAGTTATGGAATGTGTTAGATGATAGAGTTGGAGAGCCAGAAGTGAATGAGATTGAGTCACTTGAGATTATGGCTTATACTGCAATGCATTGTGTGAATTTGGTAGGAAGGGAGAGACCTGAAATGAGTGATATTGTTGCTAACTTGGAGAGGGCATTGGCCTTTGTTGAGGGTAGCCCTAGTAGTTTCTCTATAACTTCATACTCTGCCCCTCTTGAATGA 2445 0.4 MTSSSTITKTTKKVSIILVFFFTTILIITTAVNAFSSASTIAVTYGTATLCAIVAGKPTQYIQCYQNGKLIPVEPKVSFQAISGGRSFFCGLRSGGFSLQCWDTNALNTVFQPKRLFHNDVVQLTDISVGDTHVCARELHSGVARCWRGSSTDEFPSPGAAIRFRRITSGFGFSCGILEENRTVWCWGDRGNGYGVEIQRKFGNLTMSSLVAGESHVCGLTLSGVLVCKGNNGSGQLNVPLSSPSEFSSGLVLGADFTCAIRKRNGLVVCWGGSNRFGFDTHVIQNVSFESIVAGLDFVCGLTTKKLSLICWGHGWSNNLNLPIDVPLGMVLPGPCVKDSCSSCGTFPNSDELCHGSGSICYSCMVEVPLAVPLFQSPSQVPKKQFPSAKEKGMKELLAFLIVGSVGAISGLCTIVYFFWIGVRRFLRRKVDNSVKPTSAESDTYADIVPMSNLDHDFSSLRSFSSKRLGSRKMRRNRSGSSSKHVDKTESFSLFALATATNNFSVSNKIGAGSFGSVYRGKLEDGRDMAVKRGDFCTKKRKFQDKEMAFDSELALLSRLHHKHLVKLIGFCEEKYERLLVYEYMSNGSIHDHLHDKSNIHKSSSILNSWKMRIKIALGAARGIEYMHNYAVPPIIHRDIKSSNILLDSNWNARVSDFGLSLIWPENEQEFVSTITNAVGTVGYIDPEYYILNVLTTKSDVYGLGVVLLELLTGKRAVFKTEDGSSPIGVVEYAVPNIGSGELWNVLDDRVGEPEVNEIESLEIMAYTAMHCVNLVGRERPEMSDIVANLERALAFVEGSPSSFSITSYSAPLE* 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1579 814 ProSitePatterns Protein kinases ATP-binding region signature. 510 532 IPR017441 GO:0005524
Lan6g1579 814 SUPERFAMILY Protein kinase-like (PK-like) 481 790 IPR011009 -
Lan6g1579 814 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 12 807 - -
Lan6g1579 814 SMART serkin_6 504 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1579 814 Gene3D Phosphorylase Kinase; domain 1 465 584 - -
Lan6g1579 814 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672|GO:0006468
Lan6g1579 814 SUPERFAMILY RCC1/BLIP-II 68 322 IPR009091 -
Lan6g1579 814 Gene3D - 204 347 IPR009091 -
Lan6g1579 814 Gene3D - 30 203 IPR009091 -
Lan6g1579 814 Pfam Protein kinase domain 505 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1579 814 ProSiteProfiles Protein kinase domain profile. 504 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1579 814 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 12 807 IPR044815 GO:0004674
Lan6g1579 814 Gene3D Transferase(Phosphotransferase) domain 1 585 799 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1579 Lan-Chr6 23195798 23198384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1579 4 805 Receptor kinase-like Gene Family AT3G55950 51.928 0.0 721
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lan6g1579 Pkinase 1.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1579 - - gmx:100802403 1068.14