Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1565 ATGACCGAAATGAACCTTCCGCCACCGATGTTGATGGCGTTCACGGCGGTGCAGTGGCAGGAGTTGGAGCATCAAGCTCTCATCTTCACCTACCTCACCGCCGGTCTAACCGTTCCCCCTCAGCTCCTCCGTCACCCATCTCTTGGTTATTATTCCTATGATGGGAAGAAAATTGACTTGGAACCAGGTCGGTGTAGGAGGACGGATGGGAAGAAGTGGCGGTGCTCGAGGGATGCTCATCCGGACTCCAAGTACTGCGAGCGTCACATGATTCGCCGCCGCTATCGTTCAAGAAAGCTTGTGGAATCATCACAGTCTACTGCTGCTGCTCCTCATTCGAAGTCGGTTGAGGTAGAAGGAGTAGCCTCTGGGAGCAGAGGTGACAGTGGAAGTGGAACCTTTCAGAGCCTGCCCTTGCACACAAGTGGAGCCCGCGATGGTTTCGGACTTGGAAGCAATAAGCGCTTTTGCCAGCTTCAGATGGAACCCTTTCCCAGTGACTTGGTTAGCAAGGAAGAGTACAGGTTCGGGCTGAACTTTGAAGCAGATGAGCATAACTTCATACCTAAAGATCTACGAACTCCGAGATATCAAGATACCTTCGAATCAGATTGCATGTGGTCTCACATGTCCCAAGTTTCCTCAAACTCTATCTCCGAATCAAGAAACAGTTCTACAGCGACCACCAACTGCTTCCAGCAGCAAACTCCGCGAGATGCCAACCCTTTGAACATTGCTGCTGCACATTCCGAGCAACATGTCTCTATCGGGCATCTAACTTCAGCAGGGTGTGTGAAACAGGAATATCAGCCTTCTCCTTCCCTCTACTGGAAGAAGGGTCAAGGCTCTCCGGCCGCTGAATATATACCCGACACAGATTTTAACTGCAACCCTGATGTGAACGTTGATCGCGGCGATTCTCTTTATAAGTAG 933 0.508 MTEMNLPPPMLMAFTAVQWQELEHQALIFTYLTAGLTVPPQLLRHPSLGYYSYDGKKIDLEPGRCRRTDGKKWRCSRDAHPDSKYCERHMIRRRYRSRKLVESSQSTAAAPHSKSVEVEGVASGSRGDSGSGTFQSLPLHTSGARDGFGLGSNKRFCQLQMEPFPSDLVSKEEYRFGLNFEADEHNFIPKDLRTPRYQDTFESDCMWSHMSQVSSNSISESRNSSTATTNCFQQQTPRDANPLNIAAAHSEQHVSIGHLTSAGCVKQEYQPSPSLYWKKGQGSPAAEYIPDTDFNCNPDVNVDRGDSLYK* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1565 310 PANTHER - 10 307 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lan6g1565 310 MobiDBLite consensus disorder prediction 97 138 - -
Lan6g1565 310 PANTHER GROWTH-REGULATING FACTOR 10 307 - -
Lan6g1565 310 Pfam WRC 61 102 IPR014977 -
Lan6g1565 310 SMART QLQ_2 12 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lan6g1565 310 MobiDBLite consensus disorder prediction 218 237 - -
Lan6g1565 310 ProSiteProfiles WRC domain profile. 59 103 IPR014977 -
Lan6g1565 310 MobiDBLite consensus disorder prediction 288 310 - -
Lan6g1565 310 Pfam QLQ 13 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lan6g1565 310 ProSiteProfiles QLQ domain profile. 13 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1565 Lan-Chr6 22851188 22855406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1565 14 105 GRF Transcription Factor Family AT3G13960 54.054 5.88e-32 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lan6g1565 WRC 4.3e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1565 - - gmx:100809947 315.849