Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1564 ATGGGAGACGTAGCTAAGGATCTAACAGCTGGGACTGTCGGAGGGGCGGCGCAATTGATATGTGGGCACCCCTTCGACACCATCAAAGTCAAGCTTCAAAGCCAGCCTGCAGCACTCCCCGGTCAGCCTCCGAAGTTTTCGGGTGCAATTGATGCTGTCAAGCAGACAATAGCAGCCGAAGGCGCAGGGGGTTTATACAAAGGTATGGGCGCTCCATTTGCGACAGTAGCAGCCTTCAATGCTGTTCTTTTTACGGTGAGGGGACAGATGGAAACATTATTGAGATCCCATCCTGATGTCCCCCTCACAGTGAATCAGCAGTTTGTTTGTGGAGCCGGAGCTGGACTCGCTGTTTCCTTTCTTGCTTGCCCCACCGAACTAATCAAATGCAGGCTGCAAGCACAAAGTGCGCTTGCTGGCACTGGAACAGCTTCTGTTGGTGTGAAGTATGGAGGACCCCTTGATGTGGCCAGACATGTTCTTAGGTCCGAAGGAGGCGCGAAAGGCCTTTTCAAGGGCTTGATTCCCACTATGGCACGAGAGATACCCGGAAACGCTATAATGTTCGGCGTATATGAATCAATAAAACAACTGTTTGCAGGAGGCACTGATACATCCGGATTAGGTAGAGGCTCTCTGATTGTTGCTGGAGGCTTGGCTGGAGGATCGTACTGGTTCTTGGTTTATCCGACCGATGTTGTCAAGAGTGTCCTTCAAGTAGATGATTACAAAAATCCAAGGTTTTCTGGTTCATTAGATGCTTTTAGAAAGATTAAAGCTTCAGAGGGGTTCAAAGGCTTGTATAAGGGGTTCGGTCCTGCGATGGCCCGAAGCGTTCCAGCGAACGCGGCGTGCTTCTTAGCGTATGAGATGACAAGATCAGCTCTGGGATGA 894 0.5034 MGDVAKDLTAGTVGGAAQLICGHPFDTIKVKLQSQPAALPGQPPKFSGAIDAVKQTIAAEGAGGLYKGMGAPFATVAAFNAVLFTVRGQMETLLRSHPDVPLTVNQQFVCGAGAGLAVSFLACPTELIKCRLQAQSALAGTGTASVGVKYGGPLDVARHVLRSEGGAKGLFKGLIPTMAREIPGNAIMFGVYESIKQLFAGGTDTSGLGRGSLIVAGGLAGGSYWFLVYPTDVVKSVLQVDDYKNPRFSGSLDAFRKIKASEGFKGLYKGFGPAMARSVPANAACFLAYEMTRSALG* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1564 297 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 297 - -
Lan6g1564 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 198 IPR018108 -
Lan6g1564 297 SUPERFAMILY Mitochondrial carrier 3 290 IPR023395 -
Lan6g1564 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 93 IPR018108 -
Lan6g1564 297 Pfam Mitochondrial carrier protein 103 200 IPR018108 -
Lan6g1564 297 Pfam Mitochondrial carrier protein 4 95 IPR018108 -
Lan6g1564 297 Pfam Mitochondrial carrier protein 214 296 IPR018108 -
Lan6g1564 297 Gene3D Mitochondrial carrier domain 101 297 IPR023395 -
Lan6g1564 297 Gene3D Mitochondrial carrier domain 2 100 IPR023395 -
Lan6g1564 297 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 297 - -
Lan6g1564 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 295 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1564 Lan-Chr6 22847440 22849760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1564 22 296 Antiporters AT1G79900 33.571 7.51e-40 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1564 K15109 - gmx:100787304 528.094