Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1561 ATGAATAGCAGAAGTTACACCATGACAATGGAAGATAACAAAACTCACAACAATCCAAAACAACTGAAAGATGAAGAATCTCCATTACTTCTTCATGGTTCATCTAATATCAATAACAATGTTGCAGAAGCATCATCATCATTCACTGGCTCAGTGTTCAACTTATCAACTACTGTTATTGGTGCTGGAATCATGGCTTTGCCTGCAGCTATGAAAGTTCTTGGTCTCCCTATTGGAATTGGTGCTATTATCTTTCTTGCTTTCCTTACTAACACTTCATTGGAGATTCTGATGAGGTTTAGTAGAGTTGGTAAAGCTGGAACTTATGGTGAGGTTATGGGCTATGCTTTTGGAAGAATTGGAAAATTGGTGCTTCAAATTTCTGTTCTTGTTAACAATTTTGGGATTCTTGTTGTCTACATGATCATAATTGGTGATGTTCTATCTGGAACATCTTCAAATGGAACTCATCATTTTGGTGTTCTTGAAGGATGGTTCGGTGAATGCTGGTGGACCGGGCGAACTTTCGTTCTTCTGATGACAACCCTTTTAGTATTTGCTCCTTTAGGATTCTTTAAAAGGATAGATTCATTGAGATATACTTCTGCTATAGCAGTGGCTCTTGCAATTGTTTTTCTAGTTATAACTGCAGGAATCACATTTGTTAAGTTCTTTAATGGAAGTATATTGAGTCCTAGATTATTTCCTAACATTACTGGCATTGCATCTATATGGAATCTCTTCACAGCAGTTCCAGTTCTTGTCACAGCATTTGTTTGCCATTACAATTTGCATATGATAAGCAACGAGCTAGGAGACACATCCCTGATACAACCAGTCGTGCGCGTATCGCTGGTTCTGTGCTCGAGTATCTATATTCTTACAGCCTTGTTTGGACTACTCCTATTTGGTGAGTCGACTCTTGATGATGTTCTAGCCAACTTCGATACTGATCTTGGAATCCCTTACAGCAGTTTGCTCAATGACATTGTTCGAATCAGCTACGCCGTCCATCTCATGCTTGTTTTCCCAGTTATCTTCTTCTCGCTCCGCTTCAACTTCAATGATCTGTTCTTCCCTTCAGCTAGCTCATCGGATTTAGATAAACGCGTGTTTGTCTTGATCACGACCGGACTCGTTTCATTGCTGTATGTGGCTGCAAATTTTGTACCTAGCATCTGGATTGCTTTCCAATTCACTGGAGCAACTGCAACTGTTTGCCTCGGGTTTGTTTTCCCGGCTGCCATTGCTCTAAGGGATCCTCATGGCATTGCAACAAAGAATGACAAGATTATATCCATTGTCATGATTTTTCTGGCTGTGTTCTCAAATGTTGTAGCTATATACAGTAATATTGATTCCTTGTTCAGAAAAGCAAGTTGA 1383 0.3962 MNSRSYTMTMEDNKTHNNPKQLKDEESPLLLHGSSNINNNVAEASSSFTGSVFNLSTTVIGAGIMALPAAMKVLGLPIGIGAIIFLAFLTNTSLEILMRFSRVGKAGTYGEVMGYAFGRIGKLVLQISVLVNNFGILVVYMIIIGDVLSGTSSNGTHHFGVLEGWFGECWWTGRTFVLLMTTLLVFAPLGFFKRIDSLRYTSAIAVALAIVFLVITAGITFVKFFNGSILSPRLFPNITGIASIWNLFTAVPVLVTAFVCHYNLHMISNELGDTSLIQPVVRVSLVLCSSIYILTALFGLLLFGESTLDDVLANFDTDLGIPYSSLLNDIVRISYAVHLMLVFPVIFFSLRFNFNDLFFPSASSSDLDKRVFVLITTGLVSLLYVAANFVPSIWIAFQFTGATATVCLGFVFPAAIALRDPHGIATKNDKIISIVMIFLAVFSNVVAIYSNIDSLFRKAS* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1561 460 PANTHER AMINO ACID TRANSPORTER 21 459 - -
Lan6g1561 460 Pfam Transmembrane amino acid transporter protein 45 450 IPR013057 -
Lan6g1561 460 MobiDBLite consensus disorder prediction 1 22 - -
Lan6g1561 460 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 21 459 - -
Lan6g1561 460 MobiDBLite consensus disorder prediction 1 15 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1561 Lan-Chr6 22813893 22818252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1561 24 458 Amino Acid or Auxin Permease AAAP Family AT5G38820 61.416 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1561 K14207 - gmx:100778699 682.174