Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1559 ATGGATGAGATCAGAGGTAGAAATGAAACTGAGAAGATGTCTCAGTTCAGAGACATGGCTGCATCAATGTCAACAATTGGTTTGGGATGGTGTCCTTATGTGTCACAGGGTGAAGGAAGAGCTGCTACTATCGAAAAGAAGTCGCAAAAGTTTCGTGCCGATGCGAGGAAGCCTTTGGTGGCAAGATTGACCAAGGACATAGTTGACACATACCGAATATGCAATCCGCAGTTTAAATACTCCGAAGATCTAAATCCGAAAAGATTTTTGACTAGCCCATCAACTGGAGTGCTTAACGATGGCTATGATAATGCGAACTCAGATCTTATTCTGACAGTGAATCTTGTCTTGACCCATTTAGAGAAAAACAGAAGATATATTGTCAAAGATGTCCTTGGCCATGGGACATTTGGTCAAGTGGCTAAATGCTTGGATTCGGATACCGACAGTATTGTTGCTGTGAAGATCATTAAAAATCAGCCTGCATACTATCAACAGGCACTGGTTGAAGTAACTATTTTAACAACGTTAAATAAAAAGTTTGATCCTGAGGATAAGCACCATATCGTTCGTATATATGACTATTTTGTATATCAACAACATTTGTGCATATGCTTTGAACTTCTGGATACAAACTTATATGAGCTTATCAAGATGAATCATTTTAGGGGATTATCACTTAGTATTGTTCAGCTGTTCTCTAAGCAGATTTTATGTGGACTCGATCTACTAAAAGAGGCTGGCATTATTCATTGTGATCTGAAGCCTGAAAACATTCTTTTATGCACAAGCACCATGAAGCCCGCAGAAATCAAGATAATCGACTTTGGATCAGCATGCATGGAACACCATACTGTTTATTCGTATATTCAGAGTCGATACTACAGATCGCCTGAGGTTCTTCTTGGATATCAATACACGACAGATATTGATATGTGGTCCTTCGGGTGCATAGTGGCTGAATTGTTTCTTGGATTACCATTATTCCCCGGGGCTTCAGAATTTGATCTTTTGAGGCGGATGATTAAAATACTTGGAGGACAACCACCGGATTATGTACTGCGGGAGGCCAAAAACACAAGTAAATTCTTTAAGTGTATCGGCAGTCTCCAGAACATAGACAACAGTGAGAGTTCCAAAAACGGAAGAAGTGTTTATCAAGCATTGTCGGAGGAAGAATATGAAGCTAGAGATCTGAAGAAGCCATCAATTGGAAAAGAGTATTTTAGTCATATGAATCTTGAAGCAATTGTTACAAACTACCCCTATAGGAAAAACCTACCCAAGGAAGATATTCTCAAAGAGAGTCAAATACGATTGGCTCTTATTGATTTTCTGAGAGGGCTTGTTGAACTTGATCCTGCAAAACGCTGGTCACCCTTCCAGGCTTCAAAACACCCTTTTGTAACTGGGGAACCTTTTACACAGCCTTACAAGCCTTCCCCCAAGACCCCTCGAATGCCGGTAATTCAAAATATCAAGGTCGATAATCACCCAGGTGGAGGGCATTGGTTTGCTGCTGGTCTATCACCTAATTTTCTGCAGGTTCCAGGCAATAACAGGGTTTCCCATTATAGCACTCCGCATTTTCAGATGGTGCAATATCCACCTGCTAATAGTTATGGCAGCGTAGGGAGCTACGGAAGCTATAATGATAATATCGGGCATGCAAGCAGCTATGGAAGTTATGGAGAGAACAATAACATGTTTGCTTACTATTCACCTGTTGGTCCATCTGGTATGCACATGCATAACCACGGAAATATGTCAATGCTGGGAAGTACTCCTGATGCTCGGAGGAGACTGAAGTATCAACCTGCGAGTGGACTAGGTATAAGTCCATCAGCCGGAAATTTTGCTCCACTGCCCCTTGGTGCCAGCCCATCTCAATTTACTCCACCAAGTTCCTATTGTCAGATGTCAGGTTCTCCGGGACACTACGGACCTACATCTCCTGCAAGAGGAGCTTCTCATGGATCATCATTAGGGAAGTCGGCTGCAGTTAGCCAGTTCAACAGAAGAAAAAATTGGGGATATTCTGCAAGTCCTCAAACTCAAGAAACAACATTTTCTTCACATTTCCAAGCTCAATCTCATGACGGCTCAAGCCATGATGAGGGAACATCACAAGGTCTTGGCAGTTCACCATCTTATTTGCAGTCAAATATAAATCCCGGAAACTGGAAGCAGCGAGGAAGTGGAGGGATATATGCTAATCAGAGCATGACCTTGCAATCATCAGAATTGGCTCATGACAATGCGGAAACACGCTTATTGTTGCCTGATCCTGGAGATTGGGATCCTAATTATAGTGATGAGCTTCTCCTGCAAGAGGATGGTTCAGAAGAAAATTCCTTGACAACGGAGTTTGAAAGAAGTATGAATCTTGGTTCCTCTGAACCATGGGTTGGACTAGGAAGGTTCAACCATATCTCTAGCACAAGCTCTCCATTAATCATACAGAGACGAAATGGACCGAGTCAAACATTTTCTAATGTAGAGATGAATAGTCCTCCAACACATGATATTCAAGCAGCATATAACATAGCTTCTATGTCAAAGCCATTACATCTTATGCCTCCTCATATTTCTCAAAATTCTCCGAGCCGTTTCGGACAACAACCTGTTCAAAGATTCATACATGGTAGACCCCCTCATGGTGGTGGTGATTGGAACCAAATTAAGGTTCCACCTCCTTCTTCTGGATTTAGCAGTGTTGGCCAACATTCTCCCAGGAATAACTCATTCACCAATAGTATGACATGGGGGAGAAGAATGAATCCTGCAGTGTCAAGTTTACCACCAACATCTAGAACAAGAAATGATTATGCAAGGATAAACTAG 2844 0.4188 MDEIRGRNETEKMSQFRDMAASMSTIGLGWCPYVSQGEGRAATIEKKSQKFRADARKPLVARLTKDIVDTYRICNPQFKYSEDLNPKRFLTSPSTGVLNDGYDNANSDLILTVNLVLTHLEKNRRYIVKDVLGHGTFGQVAKCLDSDTDSIVAVKIIKNQPAYYQQALVEVTILTTLNKKFDPEDKHHIVRIYDYFVYQQHLCICFELLDTNLYELIKMNHFRGLSLSIVQLFSKQILCGLDLLKEAGIIHCDLKPENILLCTSTMKPAEIKIIDFGSACMEHHTVYSYIQSRYYRSPEVLLGYQYTTDIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIKILGGQPPDYVLREAKNTSKFFKCIGSLQNIDNSESSKNGRSVYQALSEEEYEARDLKKPSIGKEYFSHMNLEAIVTNYPYRKNLPKEDILKESQIRLALIDFLRGLVELDPAKRWSPFQASKHPFVTGEPFTQPYKPSPKTPRMPVIQNIKVDNHPGGGHWFAAGLSPNFLQVPGNNRVSHYSTPHFQMVQYPPANSYGSVGSYGSYNDNIGHASSYGSYGENNNMFAYYSPVGPSGMHMHNHGNMSMLGSTPDARRRLKYQPASGLGISPSAGNFAPLPLGASPSQFTPPSSYCQMSGSPGHYGPTSPARGASHGSSLGKSAAVSQFNRRKNWGYSASPQTQETTFSSHFQAQSHDGSSHDEGTSQGLGSSPSYLQSNINPGNWKQRGSGGIYANQSMTLQSSELAHDNAETRLLLPDPGDWDPNYSDELLLQEDGSEENSLTTEFERSMNLGSSEPWVGLGRFNHISSTSSPLIIQRRNGPSQTFSNVEMNSPPTHDIQAAYNIASMSKPLHLMPPHISQNSPSRFGQQPVQRFIHGRPPHGGGDWNQIKVPPPSSGFSSVGQHSPRNNSFTNSMTWGRRMNPAVSSLPPTSRTRNDYARIN* 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1559 947 SUPERFAMILY Protein kinase-like (PK-like) 120 491 IPR011009 -
Lan6g1559 947 MobiDBLite consensus disorder prediction 621 666 - -
Lan6g1559 947 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Lan6g1559 947 PANTHER BNAC04G29850D PROTEIN 47 893 - -
Lan6g1559 947 ProSiteProfiles Protein kinase domain profile. 126 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1559 947 ProSitePatterns Protein kinases ATP-binding region signature. 132 155 IPR017441 GO:0005524
Lan6g1559 947 PANTHER DUAL SPECIFICITY PROTEIN KINASE 47 893 - -
Lan6g1559 947 Gene3D Transferase(Phosphotransferase) domain 1 207 470 - -
Lan6g1559 947 MobiDBLite consensus disorder prediction 629 646 - -
Lan6g1559 947 CDD PKc_YAK1 126 469 - -
Lan6g1559 947 MobiDBLite consensus disorder prediction 883 947 - -
Lan6g1559 947 SMART serkin_6 126 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1559 947 Pfam Protein kinase domain 127 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1559 947 MobiDBLite consensus disorder prediction 678 734 - -
Lan6g1559 947 MobiDBLite consensus disorder prediction 897 947 - -
Lan6g1559 947 Gene3D Phosphorylase Kinase; domain 1 90 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1559 Lan-Chr6 22786738 22798193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1559 125 355 MAP Kinase Gene Family AT3G18040 33.333 7.91e-31 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-YAK Lan6g1559 Pkinase 1.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1559 K18670 - gmx:100786931 1520.75