Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1550 ATGAATCATTACATGAAAACTCAAATGGAGAATCTGAACATACCTGCTAATTCTGATCCTGATGCCAGCAGCGATCGGTCAGGTTCATTTCGTGTATTTGAACCATCAACGAGTCAAGATGTTGGACAGCCGAGTAGTAGAAGAGAGCAAAATGTTACAGAAGCTGTAAGACTCGATGGACGTTCGATAAATGCTTCCTCTAATTCTGCAGGCAGCAGGGGGGAATCTGTCAGCAAGTGGATGGCATTCGCTACGGAGTCCGAATTCGATGATAACAAAAACTTGAGGACTAATCAGAATGGGAAGTCATCTTCTGATCATAAACAAGTTTTAACTGAAGCAAGCATAGCTGAGAGAACTGCCGAGTGGGGTCTTGTCGCGAACTTGGATAGTTTTAAGACCTCTTTTGATGGTGACAGGATCAAAAAATTATCCGATAGATTCGTTGAATCAACTAGGACATCCGGGGAATCGAGTTATGGATCCGAGTCATCATTTGGGGTGATCCCGAGGGTCTCACAAGACTTGAAGGAAGCATTGGAGACGCTACAACAGACATTTGTTGTCTCGGATGCAACAAAGCCAGATTGTCCAATCATGTATGCCAGCACCGGTTTTTTTAGCATGACCGGTTATTCTCCAAAGGAGATTATCGGAAGGAACTGCCGATTTCTTCAGGGACCTGATACAGACAACAATGAAGTGGCGAAAATTCGGGATGCGACTAGAAATGGGAAAACTTATTGTGGCAGGCTTTTAAACTACAAGAAAAATGGAACTCCATTCTGGAATCTTCTCACTATCACCCCCATCAAAGATGACAATGGCAATACAATCAAATTCATTGGAATGCAGGTTGAAGTGAGCAAGTACACAGAAGGTCTGAATGAAAATGCGTTACGACCAAATGGATTGCCGAAGTCATTAATTCGTTACGACGCTCGTCAAAAGGAGACAGCTCTGTGTTCCATGACCGAGGTAGTCCAAACTGTTAAGGATCCAAAATCCATTATCCGGGCTAGGACTGATGATACTGCTACCAAGAATGAAGAGCAAGAGAAGCCTGATTTTGATCTTGTTTCGCCGAAATCTGTTGAAACCGGGCATACAAGTTTACCTGGTAGACAACCTTCTCCACTTAACATCCAAGGCGATATATCGCGTGTGAATTCGACTCAGGATAGGAAGAGCAAGTCATCAAGAATATCAGGCCGAACTCCTTCATTGAGTTTCAAAGGGAAATCTCTGAGTTCTGTTCGCGGAGAGGAGGAGAAGCCAATCGTCGAGCCAGAGGTTTTGATGACTAAGGAAATAGAGCGGTCCGACAGTTGGGAGCGTTCTCAAAGAGAAAGGGATATAAGGCAAGGAATCGATTTAGCAACCACGTTAGAGCGCATAGAGAAGAATTTTGTGATTTCTGATCCTAGACTTCCGGATAACCCAATTATATTTGCATCTGATAGCTTTCTTGAACTTACGGAGTATACGCGAGAAGAAATTTTAGGACGAAACTGTCGGTTTCTTCAAGGACCAGAAACTGATATGTCAACTGTGGATAAGATTAGAGATGCTATCAGAGAGCAGAGAGAGATCACTGTTCAGTTGATCAACTATACTAAGACTGGAAAGAAGTTCTGGAATTTATTTCACTTGCAACCTATGCGTGACCAAAAGGGTGAACTTCAATACTTCATTGGCGTTCAATTAGACGGAAGTGATCATGTAGAACCGTTACAAAACCGTCTATCCGAAAGAGCCGAGCTACAAAGTTCTAAGTTGGTTAAAGCCACTGCAGTAAATGTTGATGAAGCTGTTAGAGAACTTCCTGATGCCAACTTGAGACCAGAAGATTTGTGGGCAATTCATTCCAAACCTGTATTTCCACTGCCTCACAAAAGGGACAATCCTTCTTGGGTAGCAATACAAAAGATTGCTGCAAGAGACAAAAAGATTGGCTTGCATAATTTTGTGCCCATAAGGCCATTGGGTTGTGGAGATACTGGAAGTGTTCATCTGGTGGAACTCCAAGGTACTGGTGAACTATATGCAATGAAGGCAATGGAAAAATCTGTAATGCTAAATCGAAATAAGGTTCACCGTGCATGCATTGAGAGAGAGATCATATCATTACTTGATCATCCTTTTCTTCCAGCACTATACACATCCTTTGAGACTTCTACTCATGTATGTTTGATTACTGACTTCTGTCAAGGGGGAGAGTTGTTTGCATTGCTTGACAAGCAACCCATGAAAATTTTCAACGAAGAATCCGCAAGATTCTATGCAGCAGAGGTTGTCATTGGTTTGGAGTATCTCCACTGTTTAGGTATAATTTATCGAGACTTGAAGCCGGAAAATATTTTACTTCAGAAGGATGGTCATGTTGTACTAACTGATTTTGATCTATCATTTATGACATCTTCTAAACCTCAGATTGTGAAACATCCTCTGCCTAGTAACCGAAGAAAATCGCGGAGTCAACCTCCACCAACATTTGTTGCAGAGCCAGTTTCACAATCAAACTCATTTGTTGGAACTGAAGAATACATAGCTCCTGAAATTATAAGTGGAGCTGGGCACACTAGTGCCATAGATTGGTGGACATTTGGTATCTTGTTGTATGAAATGCTCTATGGTAGAACACCATTTAGAGGAAAGAATAGACAGAAGACATTTTCCAACATCTTACATAAGGATCTTACCTTTCCAAGCAGCATCCCGGCAAGCCTGCAAGCCAGACAATTGATTAATGCACTGTTGCAACGAGACCCGGGCAATCGACTAGGTTCAACTACTGGTTCCAATGAAATCAAACAACATCCGTTTTTTCGCGGAATCAATTGGCCTTTAATCCGCAACATGAGTCCACCTCCTTTAGATGTTCCTCTTAAACTGATAGGGAAAGATCCATTGGCCAAGGATGTGAAGTGGGAAGATGATGGAGTGCTTGTTAACAAGATTGATGATATTGATATTTTTTGA 2982 0.4199 MNHYMKTQMENLNIPANSDPDASSDRSGSFRVFEPSTSQDVGQPSSRREQNVTEAVRLDGRSINASSNSAGSRGESVSKWMAFATESEFDDNKNLRTNQNGKSSSDHKQVLTEASIAERTAEWGLVANLDSFKTSFDGDRIKKLSDRFVESTRTSGESSYGSESSFGVIPRVSQDLKEALETLQQTFVVSDATKPDCPIMYASTGFFSMTGYSPKEIIGRNCRFLQGPDTDNNEVAKIRDATRNGKTYCGRLLNYKKNGTPFWNLLTITPIKDDNGNTIKFIGMQVEVSKYTEGLNENALRPNGLPKSLIRYDARQKETALCSMTEVVQTVKDPKSIIRARTDDTATKNEEQEKPDFDLVSPKSVETGHTSLPGRQPSPLNIQGDISRVNSTQDRKSKSSRISGRTPSLSFKGKSLSSVRGEEEKPIVEPEVLMTKEIERSDSWERSQRERDIRQGIDLATTLERIEKNFVISDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQGPETDMSTVDKIRDAIREQREITVQLINYTKTGKKFWNLFHLQPMRDQKGELQYFIGVQLDGSDHVEPLQNRLSERAELQSSKLVKATAVNVDEAVRELPDANLRPEDLWAIHSKPVFPLPHKRDNPSWVAIQKIAARDKKIGLHNFVPIRPLGCGDTGSVHLVELQGTGELYAMKAMEKSVMLNRNKVHRACIEREIISLLDHPFLPALYTSFETSTHVCLITDFCQGGELFALLDKQPMKIFNEESARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSSKPQIVKHPLPSNRRKSRSQPPPTFVAEPVSQSNSFVGTEEYIAPEIISGAGHTSAIDWWTFGILLYEMLYGRTPFRGKNRQKTFSNILHKDLTFPSSIPASLQARQLINALLQRDPGNRLGSTTGSNEIKQHPFFRGINWPLIRNMSPPPLDVPLKLIGKDPLAKDVKWEDDGVLVNKIDDIDIF* 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1550 993 MobiDBLite consensus disorder prediction 822 837 - -
Lan6g1550 993 PANTHER FLIPPASE KINASE 1-RELATED 123 381 - -
Lan6g1550 993 PANTHER FLIPPASE KINASE 1-RELATED 389 993 - -
Lan6g1550 993 MobiDBLite consensus disorder prediction 811 837 - -
Lan6g1550 993 Gene3D Phosphorylase Kinase; domain 1 655 739 - -
Lan6g1550 993 ProSitePatterns Protein kinases ATP-binding region signature. 662 685 IPR017441 GO:0005524
Lan6g1550 993 SMART serkin_6 656 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1550 993 MobiDBLite consensus disorder prediction 60 75 - -
Lan6g1550 993 Gene3D Transferase(Phosphotransferase) domain 1 740 958 - -
Lan6g1550 993 SMART pas_2 457 526 IPR000014 -
Lan6g1550 993 SMART pas_2 174 243 IPR000014 -
Lan6g1550 993 TIGRFAM sensory_box: PAS domain S-box protein 481 573 IPR000014 -
Lan6g1550 993 TIGRFAM sensory_box: PAS domain S-box protein 180 289 IPR000014 -
Lan6g1550 993 ProSiteProfiles PAC domain profile. 246 300 IPR000700 -
Lan6g1550 993 Gene3D PAS domain 444 608 - -
Lan6g1550 993 ProSiteProfiles PAC domain profile. 529 583 IPR000700 -
Lan6g1550 993 CDD PAS 199 288 IPR000014 -
Lan6g1550 993 SMART pac_2 249 291 IPR001610 -
Lan6g1550 993 SMART pac_2 532 574 IPR001610 -
Lan6g1550 993 CDD PAS 478 570 IPR000014 -
Lan6g1550 993 ProSiteProfiles Protein kinase domain profile. 656 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1550 993 MobiDBLite consensus disorder prediction 339 424 - -
Lan6g1550 993 SUPERFAMILY Protein kinase-like (PK-like) 632 966 IPR011009 -
Lan6g1550 993 Pfam Protein kinase domain 659 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1550 993 Pfam PAS domain 478 570 IPR000014 -
Lan6g1550 993 Pfam PAS domain 193 289 IPR000014 -
Lan6g1550 993 MobiDBLite consensus disorder prediction 364 390 - -
Lan6g1550 993 MobiDBLite consensus disorder prediction 1 51 - -
Lan6g1550 993 Gene3D PAS domain 186 355 - -
Lan6g1550 993 ProSitePatterns Serine/Threonine protein kinases active-site signature. 777 789 IPR008271 GO:0004672|GO:0006468
Lan6g1550 993 SUPERFAMILY PYP-like sensor domain (PAS domain) 474 570 IPR035965 -
Lan6g1550 993 MobiDBLite consensus disorder prediction 1 76 - -
Lan6g1550 993 PANTHER BNAA02G07840D PROTEIN 123 381 - -
Lan6g1550 993 PANTHER BNAA02G07840D PROTEIN 389 993 - -
Lan6g1550 993 SUPERFAMILY PYP-like sensor domain (PAS domain) 193 285 IPR035965 -
Lan6g1550 993 ProSiteProfiles PAS repeat profile. 455 528 IPR000014 -
Lan6g1550 993 MobiDBLite consensus disorder prediction 339 360 - -
Lan6g1550 993 CDD STKc_phototropin_like 654 966 - -
Lan6g1550 993 ProSiteProfiles PAS repeat profile. 172 245 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1550 Lan-Chr6 22684744 22698861 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1550 100 993 AGC Kinase Gene Family AT5G58140 72.326 0.0 1309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lan6g1550 Pkinase 7.4e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1550 K20715 - gmx:100820096 1539.24