Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1544 ATGGCTCGTTATGCTCCTTTTGGTTCCATCATTTTCTTCTTTCTTTTGCTTCTTGTGGCCAATGAAATGGGGCCAACAATGATGGTTGAAGCAAGGACATGTGAGTCTCAGAGCCATCGCTTCAAGGGACCATGTCTGAGTGACACAAACTGTGGTTCTGTTTGCCATAATGAGGGTTTCACTGGAGGCAACTGTCGTGGCTTCCGCCGTAGATGCTTTTGTACCAAACATTGCTAA 237 0.4599 MARYAPFGSIIFFFLLLLVANEMGPTMMVEARTCESQSHRFKGPCLSDTNCGSVCHNEGFTGGNCRGFRRRCFCTKHC* 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1544 78 PANTHER DEFENSIN-LIKE PROTEIN 2-RELATED 9 78 - -
Lan6g1544 78 SUPERFAMILY Scorpion toxin-like 32 78 IPR036574 -
Lan6g1544 78 Pfam Gamma-thionin family 32 78 - -
Lan6g1544 78 ProSitePatterns Gamma-thionins family signature. 32 55 IPR008176 GO:0006952
Lan6g1544 78 CDD Knot1 43 75 IPR003614 GO:0006952
Lan6g1544 78 PANTHER DEFENSIN-LIKE PROTEIN 1 9 78 - -
Lan6g1544 78 PRINTS Purothionin signature 33 48 IPR008176 GO:0006952
Lan6g1544 78 PRINTS Purothionin signature 63 77 IPR008176 GO:0006952
Lan6g1544 78 SMART gth_4 33 78 IPR003614 GO:0006952
Lan6g1544 78 Gene3D - 32 78 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1544 Lan-Chr6 22610016 22611291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1544 9 78 Plant Defensins Gene Families AT2G02100 68.571 5.96e-32 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1544 - - gmx:547843 121.324