Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1534 ATGAAGTTTCCCAAATTCTCTACCAAGAACACTAACAATCTTCATCTTTCTTCTTCCCTTCAAGATCTTTCTTCCTATCACCTAGATCCTCAACAACCCATTAATCTTGATGGGACCCACCTTCTCCAAAATCAAAAAGCTTCAATTTTTCCCAAATCAAAACCACCCCTTCCCCTTCGCAAGAAATGGGTCAGGTTGATCGCATTTGTTCTATCACTAATTTTGTTTATTTTATCGTTTTACATGATTGTTACTGTTATTTATTCCAATTGGATTTATAATCAAGGATTAGGAAGATATTATGTTGTTCTTGATTGTGGTAGCACTGGGACTCGAGTTTATGTGTATCAAGCTCAGATTTATAACAAAGATGATAGTGTTAGTAGTAGTAGTAGTCTTCCTATAGCTATAAAATCATTAAGGGATGGATCGAAAAAGAATCGGGGTGGGCGCGCCTATGATCGAATGGAGACTGAGCCAGGGCTTGATAAGTTAGTACATAATGTATCTGGTTTGAAGGCTGCACTTAAGCCACTTCTTAAGTGGGCCCAGAAGCAGATACCGGAAGATGCTCATCGGAGTACTTTGGTTTTTCTTTATGCTACTGCTGGAGTGAGGAGGCTTCCGAGTCAGGACTCTAGATGGCTGCTGGATAGTGCTTGGAATGTGATTAAGGGTTCTTCGCCTTTTGTTTGTAGGAAGGATTCGGTTAAGATTATCACTGGCACTGAAGAGGCTTACTTTGGGTGGATTGCGCTTAACTATCATAGTCGCATTTTGGGGACTAAACCGAGGAAAGAAACATATGGTGCACTCGATTTAGGTGGGTCGTCGTTGCAGGTTACATTTGAGGGTGATCGAGAGGTGAATGGTGAGACTAGTTTGAATGTTAGGATTGGATCGGTGAACCATCATCTCACTGCTTATTCTCTTGCGGGATATGGTCTCAATGAGGCTTTTGATAAATCTGTGGCACATCTTTTTAAGAAGGAGTTCGGTTCCACCAGTGCAGTTGTAGCTAATGAAATCAAGGAACTTAAACATCCTTGCTTGCAAACTGGGTACAAGGATCAATTCACCTGCTCTCGTTGTTCTGCCAATAACCAAGAAGGTGAAAGTCCTAGAGTTAAGGGGGAAATGTTGGATAAAAAGGGACAATCAAGAACCCCGGTAATGCTTATCGGTGCTCCAAATTGGCAAGAATGCAGTGCACTTGCAAAGGTTGCGGTCAATTTGTCTGAATGGTCTGATGTCAAACCAGGACTTGATTGTGAAGTGCATCCTTGTGCTCTACGTGATAACCTCCCTCGCCCATTAGGTCACTTTTATGTGATTTCGGGTTTTTTCGTGGTGTATCGTTTTTTCAACCTATCTTCTGAAGCCACACTTGATGATATATTGGAAAAGGGTAAGGATTTCTGTGAAAAAAGATGGGATATTGCAAAAAAGAGCGTTGCTCCTCAGCCTTTTATTGAGCAATACTGCTTTAGGGCACCATATATTTCCTCGCTTTTGAGAGAGGGTTTGCACATTACTGATAAGCATATAACTGTTGGCTCCGGAAGTATCACTTGGACACTTGGGGTTGCCTTGTTAGAAGCTGGGAAGGCATATTCCCCGAGATTTGGTCTACATGGTTTTGACCTGCTCCAGACAAAGATTAATCCTTTTATTCTTATCCCCATTTTGGTAATATCCTTCATTCTCTTACTTTGCGCTTTATCATGTGTTGCCAATTGCATGCCGAGATTTTTCTGGAGGCAATATCTTCCCCTGTTCAGGCATAACAGTGCGTCGAGTGCATCAGTTATTAATATCCCGTCTCCTTTTCGGTTCCGGCGATGGAGTCCCATAATTTCTGCGAAAACGCCACTCAGCCCTACAATTGCAAGTTCACAAGAGAGACCGTTTAGCACGGAGCACGGTCTTAGTGTTAACAATGGTGGCGGCGGCATCCAGCTTATGGAATCTTCGTTTTACCCATCGGCTAGTAGTGTTTCGCATAGCTATTCCTCGAGCAATTTATCTCAGATGCAGTTTGATAGTAGTAATATAGGTACTTTCTGGACGCCCCACAGAAGTCAGATGCGGCTGCAGAGTAGGAGATCACAATCTCGAGACGACCTGATTTCCTCAGTGCCTGACGCACACATTGTGAATCTTTAA 2166 0.4261 MKFPKFSTKNTNNLHLSSSLQDLSSYHLDPQQPINLDGTHLLQNQKASIFPKSKPPLPLRKKWVRLIAFVLSLILFILSFYMIVTVIYSNWIYNQGLGRYYVVLDCGSTGTRVYVYQAQIYNKDDSVSSSSSLPIAIKSLRDGSKKNRGGRAYDRMETEPGLDKLVHNVSGLKAALKPLLKWAQKQIPEDAHRSTLVFLYATAGVRRLPSQDSRWLLDSAWNVIKGSSPFVCRKDSVKIITGTEEAYFGWIALNYHSRILGTKPRKETYGALDLGGSSLQVTFEGDREVNGETSLNVRIGSVNHHLTAYSLAGYGLNEAFDKSVAHLFKKEFGSTSAVVANEIKELKHPCLQTGYKDQFTCSRCSANNQEGESPRVKGEMLDKKGQSRTPVMLIGAPNWQECSALAKVAVNLSEWSDVKPGLDCEVHPCALRDNLPRPLGHFYVISGFFVVYRFFNLSSEATLDDILEKGKDFCEKRWDIAKKSVAPQPFIEQYCFRAPYISSLLREGLHITDKHITVGSGSITWTLGVALLEAGKAYSPRFGLHGFDLLQTKINPFILIPILVISFILLLCALSCVANCMPRFFWRQYLPLFRHNSASSASVINIPSPFRFRRWSPIISAKTPLSPTIASSQERPFSTEHGLSVNNGGGGIQLMESSFYPSASSVSHSYSSSNLSQMQFDSSNIGTFWTPHRSQMRLQSRRSQSRDDLISSVPDAHIVNL* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1534 721 Pfam GDA1/CD39 (nucleoside phosphatase) family 99 532 IPR000407 GO:0016787
Lan6g1534 721 Gene3D - 93 242 - -
Lan6g1534 721 Gene3D Exopolyphosphatase. Domain 2 243 520 - -
Lan6g1534 721 PANTHER GDA1/CD39 NUCLEOSIDE PHOSPHATASE FAMILY PROTEIN 38 693 - -
Lan6g1534 721 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 38 693 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1534 Lan-Chr6 22487198 22491129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1534 12 721 Nodulin-like Gene Family AT4G19180 58.554 0.0 798
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1534 - - lja:Lj0g3v0174799.1 941.414
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0467 17 3549940 3553509 Lan6g1534 6 22487198 22491129 LSH
Lan17g0467 17 3549940 3553509 Lan6g1534 6 22487198 22491129 PCT
Lan6g1534 6 22487198 22491129 Lan6g1534 6 22487198 22491129 PCT
Lan6g1534 6 22487198 22491129 Lan17g0467 17 3549940 3553509 PCT