Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1533 ATGAAGAACATTTTCAAGAAGTTTCACATAGGTACCAACCACCATGACCATAACCGATCCAATGAAGCTCCCACCTCTTATTCCTCTATTCCACCACAGTCTAGCTCCACCGATCACCACCGCACTCGTCCGACTCAGAATCCTGCTGCCTCCCCTGCCAATCTTTCTACGCCTGCCGACGCTTCCTTTCCAGCAACCACCATGGCTAACCAGAAAGACTATTTATCTTCGGAGGAGGAGTTTCAGGTTCAGCTAGCCCTCGCCATAAGTGCTTCCAATTCAGACTCCCACTATGATCAAAGATTGGGAAGCCATCAAATCGATTCGAGAAGGAATGACTATGGTGTAGCGGATGCGCTGTCTAGGCACTATTGGGAATACAATGTGCTTGACTATGAGGAGAAAGTAGTAGATGGTTTTTATGATGTATATGGGCTCTCTACAAATATAGCAATGCAAGGAAAGATGCCATTTCTGACAGATCTTGAAGCAAAACCTGAGAGTTCTGGCTTAGAGGTTGTCATAGTTGACCGTACAATTGATCCTGCTCTCGAAGAACTGATTCAAATTGCACATTGTATTGCATTAGACTGTCCTGCCACCGAGGTTGCTATTTTGGTACAAAGGCTTGCTGAACTTGTTATAGGCCATATGGGTGGTCCTGTAAAGGATGCTAATATTATACTGGCAAGATGGACAGAGAGAAGTAGAGAGTTAAGAACATCTCAAAATACTAGTGTGTTGCCTATTGGGTACATAAACATTGGGCTCTCCAGACATCGTGCTTTGCTTTTCAAGGTATTAGCTGACAATATCAAAATGCCTTGTAGACTGGTAAAAGGTAGTCATTATACTGGTGTTGAGGATGATGCTGTCAACATTATAAAGTTGGTGGATGAAAGGGAGTTTTTGGTTGATCTCATGGCTGCCCCTGGAACGCTTATCCCTGCTGATATTTCAACTCCAAAGGATACTTACTTGACTCCTGACAACCCCAAGGTTTTACCAAGTTTACCTTCTGCTAAGGAAACTGATTTTTATTACACTAGACTAGTGCCATCTCATGGTGAAGGTATTAATCAGAATTCTGCAGTAGAAGGTTCTTCACCATTGAATGGACAAGCATATTTTGACCAGTCAGAGTACATGCCTTCAAACTTTGGTTTTAATGGTGGCTCTGGTGTTCGTCCCTTGAAAATGCCTAATAGAATGACTCTTAACCAACTAGAAAATATTGCACAACCATCTAGTGCTTCTATGTACAAAGGGATTCATGGAATAAACATAGCTGGTAACAGGACTAGACTGGATGTCAATGTTGTACCATATGGCCAGAAAAATTCCGATGACTCTCAGAGCCTTTCTGCTGAGCTTAACCCTTTCCAGAAAAAAGGAACTAGCAAGATCTCTGATCATAACAGGACTGTGGAAAGTAACGCTCCCGATCTTCAGAGTACAAGAAAAAATACTGTGTGTGGTCGACCCCCTGGCCCTTTGGCGTGGAAGAATTGTTGTGCTTACAATGAAGTCCCCAGGAAAGTTAATTGTGATCCTAATGATTACAACTTTCCTAATAGTTCTCCCATTTCTGAAAAGTTTGATCACAATGGTTCCAAATCATCAAATAGTTCAAATTTAAGGAATGATAGAAAAGCTCCAAAGTTGGCCCAAGATAATGGTTCAGTTGCACTATCTGGTGCAGATGAATTGGAGAGGGTTGAGGATCTGAATGTTGATTGTAACAGAGGCAAACCGGAAAATTATCGAAATGACATGTTAGATGTGGTTATAGAGCTCAAGAACATTAAAATTGGTCATCTTGACAAGAGGAAGGGCACAAGTGACAGATTCATGGGGGAAAGCTTGAAATTAAAGGGTCCAGATAGTCGTAGCTCCCCGATTGATTCCAATACAAACAAGATTGATCAGATGTTGGATGATGTAGATGTCATTGAATGTGAGATTCGATGGGAGGATCTGGTTATTGGTGAAAGAATTGGTCTAGGTTCATATGGCGAGGTATTCCGTGCTGACTGGAATGGAACCGAGGTTGCTGTGAAGAAATTTTTGGATCAGGATTTTTCAGGCGATGCCTTGTCTGAATTCAAAAGAGAAGTACGGATAATGCGTAGACTGCGTCATCCAAATGTTGTTAATTTTATTGGTGCTGTTACTCGTCCTCCCAATCTCTCAATCATTACAGAGTTTCTTCCAAGTTTTCAAACTGGTGTTACATTTTACAGAGGGAGCTTGTATCATATTCTTCATCATCCTCATTGCCAGATCGATGAGAAACAAAGGATAAAAATTGCTCTGGATGTGGCCAGGGGCATGAATTGCTTACATTCCAGCACACCTATAGTTGTTCACCGAGATCTGAAATCCCTAAATCTTTTGGTTGATGAGAACTGGAATGTAAAGGTATGTGATTTTGGGTTGTCACGCTTGAAACCCAACACATTCTTGTCATCCAAGTCAACTGCTGGAACGCCGGAATGGATGGCGCCTGAAGTTCTCCGCAATGAGCCCTCAAATGAAAAATGTGACGTTTATAGTTTTGGAGTCATTCTCTGGGAGATTGCAACTTTAAAGTTGCCTTGGACAGGAATGAATCCTATGCAAGTTGTTGCTGCAGTGGGTTTTCAAGACTGCCACCTTGATATCCCTAAGGATGTTGACCCTTCAGTTGCAAGCATAATCTGGGAATGTTTGCAACAGGATCCAAATTTGCGTCCCTCATTTGCGCAGCTCACCGTGACTCTAAAGCCTCTGCAACGTCTGTCTATCGCATCTCATCAAGACCAGCTGCCGTAA 2814 0.4232 MKNIFKKFHIGTNHHDHNRSNEAPTSYSSIPPQSSSTDHHRTRPTQNPAASPANLSTPADASFPATTMANQKDYLSSEEEFQVQLALAISASNSDSHYDQRLGSHQIDSRRNDYGVADALSRHYWEYNVLDYEEKVVDGFYDVYGLSTNIAMQGKMPFLTDLEAKPESSGLEVVIVDRTIDPALEELIQIAHCIALDCPATEVAILVQRLAELVIGHMGGPVKDANIILARWTERSRELRTSQNTSVLPIGYINIGLSRHRALLFKVLADNIKMPCRLVKGSHYTGVEDDAVNIIKLVDEREFLVDLMAAPGTLIPADISTPKDTYLTPDNPKVLPSLPSAKETDFYYTRLVPSHGEGINQNSAVEGSSPLNGQAYFDQSEYMPSNFGFNGGSGVRPLKMPNRMTLNQLENIAQPSSASMYKGIHGINIAGNRTRLDVNVVPYGQKNSDDSQSLSAELNPFQKKGTSKISDHNRTVESNAPDLQSTRKNTVCGRPPGPLAWKNCCAYNEVPRKVNCDPNDYNFPNSSPISEKFDHNGSKSSNSSNLRNDRKAPKLAQDNGSVALSGADELERVEDLNVDCNRGKPENYRNDMLDVVIELKNIKIGHLDKRKGTSDRFMGESLKLKGPDSRSSPIDSNTNKIDQMLDDVDVIECEIRWEDLVIGERIGLGSYGEVFRADWNGTEVAVKKFLDQDFSGDALSEFKREVRIMRRLRHPNVVNFIGAVTRPPNLSIITEFLPSFQTGVTFYRGSLYHILHHPHCQIDEKQRIKIALDVARGMNCLHSSTPIVVHRDLKSLNLLVDENWNVKVCDFGLSRLKPNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWEIATLKLPWTGMNPMQVVAAVGFQDCHLDIPKDVDPSVASIIWECLQQDPNLRPSFAQLTVTLKPLQRLSIASHQDQLP* 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1533 937 MobiDBLite consensus disorder prediction 464 491 - -
Lan6g1533 937 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 66 935 - -
Lan6g1533 937 Pfam Ethylene-responsive protein kinase Le-CTR1 117 315 - -
Lan6g1533 937 CDD STKc_MAP3K-like 666 921 - -
Lan6g1533 937 ProSitePatterns Protein kinases ATP-binding region signature. 666 688 IPR017441 GO:0005524
Lan6g1533 937 MobiDBLite consensus disorder prediction 464 493 - -
Lan6g1533 937 MobiDBLite consensus disorder prediction 527 563 - -
Lan6g1533 937 ProSiteProfiles Protein kinase domain profile. 660 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1533 937 PANTHER SERINE-THREONINE PROTEIN KINASE 66 935 - -
Lan6g1533 937 MobiDBLite consensus disorder prediction 1 63 - -
Lan6g1533 937 MobiDBLite consensus disorder prediction 527 550 - -
Lan6g1533 937 SUPERFAMILY Protein kinase-like (PK-like) 642 917 IPR011009 -
Lan6g1533 937 Pfam Protein tyrosine and serine/threonine kinase 661 920 IPR001245 GO:0004672|GO:0006468
Lan6g1533 937 Gene3D Transferase(Phosphotransferase) domain 1 748 932 - -
Lan6g1533 937 SMART serkin_6 660 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1533 937 ProSitePatterns Serine/Threonine protein kinases active-site signature. 788 800 IPR008271 GO:0004672|GO:0006468
Lan6g1533 937 MobiDBLite consensus disorder prediction 22 63 - -
Lan6g1533 937 Gene3D Phosphorylase Kinase; domain 1 653 737 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1533 Lan-Chr6 22475461 22484724 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1533 1 905 MAP Kinase Kinase Kinase AT1G08720 51.383 0.0 831
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lan6g1533 PK_Tyr_Ser-Thr 2.8e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1533 - - aprc:113870732 1216.45