Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1527 ATGCATTTTGTAGTTATTCTCTTCTCTGCTACCATACTATGTTTGCACCCTAAGAACACTGCTAGTGCCTTAGGAAATGACACTGATCAATTATCATTGCTAAGGTTCAAAGAATCCATAGAAGACGACCCGTTCGATATCTTGAGTTCTTGGAACACTTCTACTTACTTTTGCAACTGGCGTGGAGTCTCATGCAGCATGAGGCATCAAAGGGTCACTGCCCTGAACCTACAAGGGTATGCCTTACATGGACTAATATCACCATATATTGGCAACCTTAGCTTTTTGAGGTATGTCAACCTTCAAAACAACAGCTTCTATGGCGAAATCCCGAAGGAAATCGGTCGTTTGTTCCGGCTGCAGCAGCTATATCTTACCAATAACACATTAGGGGGTCAAATTCCTACCAACTTGTCTGGCTGCTCTGAACTCAAAAGCTTGAGCCTATCAGGAAACAATTTTTTTGGCGAAATACCTATGGAGCTTAGTTTTCTAACTAAGCTTGAACAGCTATATATTTCTATGAACAATTTGATAGGTGAAATCCCTGCATCTATAGGAAATCTTTCATCTCTTATTGTTCTTTCTTTCGGAATTAATAACTTGGAGGGAAAGGTACCACAAGAGATTTTCCGTCTTAAAAACTTAACTCACGTATCTATTGCTTCTAACAAACTATCCGGTATGCTTCCTTCGACGCTCTACAATATGTCATCTCTTACATTCTTCTCAGCTGGACTCAACAAATTTAATGGCTCTCTACCTGCAAATATGTTCCTTACACTGCCAAATCTCGAACAATTTGGAATCGGGATGAATAATATCTCAGGTCCTATCCCCACGTCCATCTCCAACGCGACTCGTTTGCTGTTATTTAACATCCCTAGGAATAACTTTGTAGGCCAAATTCCTACCGGAATAGGAAATCTTCGAGACGTATGGTCGATCGCTATGGAATACAATCATCTGGGGACTAATTCATCTAATGACCTGGATTTCTTGACATCTTTGACAAACTGCACCAAATTGCAAGTCTTAGATTTAAATCTAAACAACTTTGGAGGTTCTTTGCCAAGCTCTGTAGCCAACTTTTCCAATCAGCTAAACCAGTTTTATATCGGCGGAAATCAGATTACTGGAACTATTCCTGAAGGATTAGGAAATCTCATCAACTTGATTGGTTTTGACTTGGAGTTCAACCTTCTCAAAGGGTCCATTCCGGCATCTTTCGGCAAGTTTCAAAAGATGCAATCATTGACCTTAAATGTAAATAAACTTTCAGGCCAAATTCCATCATCCATTGGAAACCTTACTCAGTTGTTTCAACTCGACTTATCACAGAACATGCTAGAAGGAAGCATTCCAACTAGTATTGGAAATTGCCAAACTTTACAGTACCTAGACCTTTCACATAACAACCTTATCGGAACCATTCCTTTGCAGGTCATTAGTCTTTCTTCCCTGTCGTTGTTACTGAACTTATCCCGGAACTCGTTAAATGGTGTCCTACCCTTTGAGATTGGCAACCTCAAAAGCATCAATAAGTTGGATGTTTCTAAAAATGATCTGTCGGGTCAAATTCCTGCAACAATTGGACAATGCATAAGTTTGGAATTCCTTAACTTACAAGGGAATTCCTTCGATGGAGCCATACCATTATCGTTTGCTTCATTGAAAGGCCTTCGATATTTAGATTTGTCACAAAACAACTTGTCCGGAGAAATTCCAGAAGGCCTAGGGGGCATTCCGATTCTAGAGTACTTAAATGTTTCTTTTAACAGTTTGGATGGCGAAGTTCCAACTGAAGGTGTCTTTAAAAATTCAAGCGCGATATCCGTAAAAGGCAACAAGGACCTCTGTGGGGGTATCACAGAGCTACATCTACCTCCATGCCCTGTGGAAGTTAGGACACACAAAAAGCATCACCCTTGGAAGGTAGTAGTAATAATAATTTCTGTGGTTCTCTTTCTCCTACTTTTATCATACTCCATTTCTATCTATTGGAAGAGAAAGAAAAACTTCGGAATATCTACTTCAACACCAACAATGGATCATCTTTCCAAGGTTTCTTACCAGACACTCCACCAAGCAACAAATGGATTTTCACCGAATAATTTGATAGGATCTGGTGCTTTCGGCTTTGTGTATAAAGGAATTATTGAGCCTGCAGAAAGAATTGTTGCTATAAAAGTCTTAAACCTTCTAAAGAAGGGAGCTGAGAAGAGTTTCATTGCGGAGTGTAATGCGCTCAGAAGTATCCGCCACAGGAATCTGATTAAGATTATAACATGTTGCTCTAGTATCGATTACAATAGAAATGAATTTAAAGCTCTAGTTTTCGAGTACATAGAAAATGGCAGCTTAGAAGAATGGTTGCATTCAGAGTCAAAACTTAAAGATCAATCAAGTTTCGACCTTCTTCAAAGACTAAACATTCTCATACATGTTGGTTCTGCGTTGTGCTATCTTCACTATGAATGTGAGCAGCCGATTGTTCACTGCGATTTAAAACCGAGCAATATCCTTCTTGACAATGACATGGTTGCTCATGTGAGTGATTTTGGATTAGCGAGACTTCTCTGTACCATTAACGATATCTCTCATAAACAAACCAGCACAATCGGAATAAAGGGAACGGTTGGTTATGCTCCACCAGAGTATGGAATAGGATCTCAAGTTTCAACAATGGGTGATGTATATAGCTTTGGAATCCTTGTACTGGAAATATTGACAGGAAGAAAACCCACTGATGAAATGTTTGTAAATGGAATCAATCTGAATAACTTTGTCAAGGTTTCGTTGCCGGATAAATTCCTACAGATAGTGGATTCAGCACTTCTTCCAGAGTTGAAACAAACAGCTGCATCATCAGAAGAAGAAAGTGAGATAAATGAGGACATGAGCCAGATGCATCCTAATGATATGCAGAAATGCTTGCTTGAACTGTTTTGCATTGGACTTGCTTGTTCGGCGGAGTCGCCGAAAGAAAGAATTACAATGAGGGATGTCAACAGGGAACTAGAACAAATCAAAAATGTGTTTTTTGGTGGCAGATCAAAGGAGATTGACTGA 3072 0.3949 MHFVVILFSATILCLHPKNTASALGNDTDQLSLLRFKESIEDDPFDILSSWNTSTYFCNWRGVSCSMRHQRVTALNLQGYALHGLISPYIGNLSFLRYVNLQNNSFYGEIPKEIGRLFRLQQLYLTNNTLGGQIPTNLSGCSELKSLSLSGNNFFGEIPMELSFLTKLEQLYISMNNLIGEIPASIGNLSSLIVLSFGINNLEGKVPQEIFRLKNLTHVSIASNKLSGMLPSTLYNMSSLTFFSAGLNKFNGSLPANMFLTLPNLEQFGIGMNNISGPIPTSISNATRLLLFNIPRNNFVGQIPTGIGNLRDVWSIAMEYNHLGTNSSNDLDFLTSLTNCTKLQVLDLNLNNFGGSLPSSVANFSNQLNQFYIGGNQITGTIPEGLGNLINLIGFDLEFNLLKGSIPASFGKFQKMQSLTLNVNKLSGQIPSSIGNLTQLFQLDLSQNMLEGSIPTSIGNCQTLQYLDLSHNNLIGTIPLQVISLSSLSLLLNLSRNSLNGVLPFEIGNLKSINKLDVSKNDLSGQIPATIGQCISLEFLNLQGNSFDGAIPLSFASLKGLRYLDLSQNNLSGEIPEGLGGIPILEYLNVSFNSLDGEVPTEGVFKNSSAISVKGNKDLCGGITELHLPPCPVEVRTHKKHHPWKVVVIIISVVLFLLLLSYSISIYWKRKKNFGISTSTPTMDHLSKVSYQTLHQATNGFSPNNLIGSGAFGFVYKGIIEPAERIVAIKVLNLLKKGAEKSFIAECNALRSIRHRNLIKIITCCSSIDYNRNEFKALVFEYIENGSLEEWLHSESKLKDQSSFDLLQRLNILIHVGSALCYLHYECEQPIVHCDLKPSNILLDNDMVAHVSDFGLARLLCTINDISHKQTSTIGIKGTVGYAPPEYGIGSQVSTMGDVYSFGILVLEILTGRKPTDEMFVNGINLNNFVKVSLPDKFLQIVDSALLPELKQTAASSEEESEINEDMSQMHPNDMQKCLLELFCIGLACSAESPKERITMRDVNRELEQIKNVFFGGRSKEID* 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1527 1023 ProSitePatterns Protein kinases ATP-binding region signature. 707 730 IPR017441 GO:0005524
Lan6g1527 1023 Gene3D Ribonuclease Inhibitor 325 632 IPR032675 -
Lan6g1527 1023 Gene3D Ribonuclease Inhibitor 25 314 IPR032675 -
Lan6g1527 1023 ProSiteProfiles Protein kinase domain profile. 701 1015 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1527 1023 Pfam Leucine rich repeat 536 595 IPR001611 GO:0005515
Lan6g1527 1023 Pfam Leucine rich repeat 415 474 IPR001611 GO:0005515
Lan6g1527 1023 PRINTS Leucine-rich repeat signature 464 477 - -
Lan6g1527 1023 PRINTS Leucine-rich repeat signature 558 571 - -
Lan6g1527 1023 PANTHER LRR RECEPTOR-LIKE KINASE 17 1016 - -
Lan6g1527 1023 Gene3D Phosphorylase Kinase; domain 1 663 782 - -
Lan6g1527 1023 SUPERFAMILY Protein kinase-like (PK-like) 674 1009 IPR011009 -
Lan6g1527 1023 PANTHER OS04G0122200 PROTEIN 17 1016 - -
Lan6g1527 1023 SUPERFAMILY L domain-like 367 621 - -
Lan6g1527 1023 ProSitePatterns Serine/Threonine protein kinases active-site signature. 831 843 IPR008271 GO:0004672|GO:0006468
Lan6g1527 1023 Gene3D Transferase(Phosphotransferase) domain 1 783 1015 - -
Lan6g1527 1023 Pfam Protein kinase domain 704 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1527 1023 SUPERFAMILY L domain-like 28 323 - -
Lan6g1527 1023 SMART serkin_6 701 1015 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1527 1023 SMART LRR_typ_2 510 534 IPR003591 -
Lan6g1527 1023 SMART LRR_typ_2 165 189 IPR003591 -
Lan6g1527 1023 SMART LRR_typ_2 117 141 IPR003591 -
Lan6g1527 1023 SMART LRR_typ_2 437 461 IPR003591 -
Lan6g1527 1023 SMART LRR_typ_2 213 236 IPR003591 -
Lan6g1527 1023 SMART LRR_typ_2 558 582 IPR003591 -
Lan6g1527 1023 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1527 Lan-Chr6 22390643 22393818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1527 26 1015 Receptor kinase-like Gene Family AT3G47570 45.309 0.0 840
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lan6g1527 Pkinase 6.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1527 - - gmx:100778093 1130.93