Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1517 ATGGAGAAAACTGAATCATCATCAGATCATGTTGTTCTTTTTGTTGAGCAAAATAGCCCTAAAGTTTCTTCTATAGACATTGAAAATGGCAAAAATGATGAGAAACCAAAGCACCCTTTAAGGGTAAAAACTCTTAACCGTCTCAGCTTTTCAAAACCCAAGTCCAGAATCCAAGAATACAACTACATACCCCACAAGAGAGTAACAATTTCTGAAGAAAATGACATTCAATTCACTGATGAAGAAGATGAGGAAGATAAATGGGATCTAGATGAAGAAGATATTGAAGAGGATGATGAAGAAAATGGTTCAAAATCTCACAAAAAGAGGAATTGTAAGGTTAAGTGGAGGCTTTTGTTGGAGTGGGTTTTGTTTCTTAACATATTAACTTGTTTGGTTTGTTCACTCATTATAAGTTCTATTAAGAATATTCATATATTGGGTTTGGAAATTTGGAAATGGTGTTTGATGGCTATGGTTACTTTTAGTGGCCGTTTGGTTTCTGGTTGGTTAACCGGTGTTACTGTTTTAGTGCTTGAGAGAAACTTGATGCTAAGAGATAAAGCCTTGTACTTCATTTATGGACTCAGAAAGAGCATCAGAAATTGTTTATGGTTAGGTCTTGTTTTGCTTTCATATTGGAGTGTTGTATTTGAGGATGTCCAGAAGAAAAATCATAACTTCATCAACAAGGTTTTTCAGGCATTAGTGGCTGTGTTAGTGGCTGCAACCATATGGCTAGTAAAGATAGTGTTGGTGAAAATGCTTGCTTCTTCATTCCATGTCACAACATATTTCGACAGAATGAAAGAAAGTGTTTTTCATCACTACATATTAGAAACATTGTCTGGTCCACCAATGCAAGATGCTGAAGAAATATTGAAACAGCAACACCTAACAGGATCTAAGTCCATGCCAACAAGGTTTAAGGATACAAAGAACATGTACAAGTCAAAGAAATTTGGGTCAAGAAAGATTGATATGGAGAAGCTGAAAGAACTTAGCATGGAAAGATCAAAATCTGCATGGAGTGTGAAGAGACTTGTTAACTATGTTAGGTCTTCAGGTTTATCAACCATTTCAAGAACTGTGGATGATTTTGGTAATACTGAGTCTGAGATCAGTAGTGAGTGGCAAGCTAGAAATTTTGCACAAAAGATTTTCAAGAATGTTGCCAAACCTGGAGCCAAGTACATTGAAGAGGAGGATCTCATGAGATTTTTGAAGAGGGTTGAGATACACACCATATTCCCACTCTTTGAAGGTGCCCTTGAAACTGGAAAGATCAGTAGATCTTCATTTAGAAATTGGATGATTGGTGCTTATTATGAACGAAAATCTCTAGCACAATCACTAAATGATACAAAAACTGCAGTGCAACAACTTCACAAATTAGCAAGTGCAGTTGTGAGTGTAATAATAATAATAGTGGTGCTATTGCTGATGGAGGTGGCTACATTAAAGATAATACTTTTCTGCATTACACAAACAGTTTTAATAGGTGTTGCTTTCCAAGGTACTTGCAAGACTGTGTTAGAAGCTATTATCTTTGTCTTCGTCATGCACCCTTTTGATATTGGAGATCGTTGCGTCATTGATGGTGTTCAGATGATTGTGGAAGAGATGAATATATTAACAACAGTATTTCTCAGATATGACAATGAGAAAATCTACTACCCTAATGCAATTTTGCTCTCTAAGCCAATAAGCAATTTCTATAGGAGCCCAGAGATGAGTGATACAATTGATTTCACCATTGATGCTACAACTCCCATGGAAAACATCATTGCACTCAAGAAATCAATACAAATGTACATTGAGAGCAAACCAAAGCATTGGAATCCAAAGCATAGTGTGATAGCAAAACAAATAGAAAATGTGGACAAATTGAAGTTATGCTTATGTGTGCAACATACTATCAATCATCAAAACTATGGTGAGAGAAACATAAGGATTACAGAACTACTCTTGGAATTGAAAAAGATATTTGAGATTCATGGTATCAAGTATCATCTTCTTCCTCAAGAAATTCACATTACCCATATGAATATTAATGAAAATGGGAGAGTTTTGTTTCAATCATGA 2085 0.3549 MEKTESSSDHVVLFVEQNSPKVSSIDIENGKNDEKPKHPLRVKTLNRLSFSKPKSRIQEYNYIPHKRVTISEENDIQFTDEEDEEDKWDLDEEDIEEDDEENGSKSHKKRNCKVKWRLLLEWVLFLNILTCLVCSLIISSIKNIHILGLEIWKWCLMAMVTFSGRLVSGWLTGVTVLVLERNLMLRDKALYFIYGLRKSIRNCLWLGLVLLSYWSVVFEDVQKKNHNFINKVFQALVAVLVAATIWLVKIVLVKMLASSFHVTTYFDRMKESVFHHYILETLSGPPMQDAEEILKQQHLTGSKSMPTRFKDTKNMYKSKKFGSRKIDMEKLKELSMERSKSAWSVKRLVNYVRSSGLSTISRTVDDFGNTESEISSEWQARNFAQKIFKNVAKPGAKYIEEEDLMRFLKRVEIHTIFPLFEGALETGKISRSSFRNWMIGAYYERKSLAQSLNDTKTAVQQLHKLASAVVSVIIIIVVLLLMEVATLKIILFCITQTVLIGVAFQGTCKTVLEAIIFVFVMHPFDIGDRCVIDGVQMIVEEMNILTTVFLRYDNEKIYYPNAILLSKPISNFYRSPEMSDTIDFTIDATTPMENIIALKKSIQMYIESKPKHWNPKHSVIAKQIENVDKLKLCLCVQHTINHQNYGERNIRITELLLELKKIFEIHGIKYHLLPQEIHITHMNINENGRVLFQS* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1517 694 MobiDBLite consensus disorder prediction 74 106 - -
Lan6g1517 694 PIRSF Memb_At2g17000 4 691 IPR016688 -
Lan6g1517 694 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 6 691 IPR016688 -
Lan6g1517 694 MobiDBLite consensus disorder prediction 75 100 - -
Lan6g1517 694 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 6 691 - -
Lan6g1517 694 Gene3D - 523 572 IPR023408 -
Lan6g1517 694 Pfam Mechanosensitive ion channel 464 669 IPR006685 GO:0016020|GO:0055085
Lan6g1517 694 SUPERFAMILY Sm-like ribonucleoproteins 514 572 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1517 Lan-Chr6 22234103 22242141 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1517 2 683 Mechanosensitive Ion Channel Family AT5G12080 41.538 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1517 K22048 - gmx:100813521 1065.45