Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1516 ATGGAAAGGTACAAGTTAATTAAGGAAGTTGGTGATGGATCATTCGGCACGGTCTGGAGAGCTATTAATAAGCAAAATGGTGAAGTTGTTGCAATCAAGAAAATGAAGAAGAAATATTACTCTTGGGAGGAGTGTGTAAACCTGAGAGAAGTCAAGTCATTACGGAAAATGAATCACCAAAATATCGTGAAGTTGAAGGAAGTTATTCGAGAAAGTGACGTTCTGTTCTTCGTTTTTGAGTACATGGAGTTCAACCTCTACCAACTTATGAAAAAGCGGGAATATCTGTTTTCTGAAGGTGAAGTTAGAAACTTGTGTTTTCAAGTTTTCCAAGGTCTTTCTTACATGCACCAGCGTGGATACTTCCACCGTGATTTGAAGCCAGAAAACCTGCTGGTCACCAAGGATATCATGAAAATTGCTGATTTTGGCCTAGTCCGAGAGATCAGTTCACAGCCACCATTCACTGAGTATGTCTCCACCAGATGGTATCGTGCTCCTGAAGTCCTGCTTCAGTCGTATCTGTATAGCTCCAAAGTTGACATGTGGGCAATGGGTGCAATTATGGCCGAGTTGTTCACTCTGCGTCCCCTGTTTCCAGGTGCCAGTGAAGCGGATGAGATTTACAAAATATGCAGTGTCATAGGTAGTCCAACTACTGAATCTTGGACAGATGGACTCAAACTGGCTAGGGACCTCAACTTTCAGTTTCCACAGCTTGCTGGTGTACATCTCTCAGGACTGATTCCATCCATAAGTGATGATGCAATCAGCCTTATCACTTCTCTTTGCTTATGGGATCCATGCAAGAGACCAACAGCAGCAGAGGTCCTTCAACATCCTTTCTTCCAGAGTTGCTTTTACATCCCTCCATCCCTTCGCACCAAAGCAGTAGCCAGAACTCCACCATCTTGTAGTGTCAGGGGAGCATTAGATCGGCAAGCGGTCAAGAGACATTCTGTTGCTTTGCCTGATTCAAAGCCCACCAATATTTTTTCTTCATCAAAATTACATCCATCTTTAGCTTCAGGTGTGCAACGCAAGCTGGATATGGCAAATGAAGATGGAGTTAAGAACGATAAGTCACTGAAGACTAGTAGGCAACCAAAATATCGACCTCCGGGAAAGGACAGCCCAACTTCTACTAACAAGGTTCAGAATGCACGACGGGTTTCAGAAACCACTGAGAAGTTAGCTAATATGTCTGTTGGTACACGAAGATGGTCCTTGGGGCAGCCCCTTCCGCCTACTACACTGAAGAACAGAGGCAATTTGGTTTCTGAATCTGGAAACTTGGTCAGGCCTGCACAACATGTTCCAACTACAAGAAGAACTTATACAAGAAAAGTTACCAGATGA 1359 0.4371 MERYKLIKEVGDGSFGTVWRAINKQNGEVVAIKKMKKKYYSWEECVNLREVKSLRKMNHQNIVKLKEVIRESDVLFFVFEYMEFNLYQLMKKREYLFSEGEVRNLCFQVFQGLSYMHQRGYFHRDLKPENLLVTKDIMKIADFGLVREISSQPPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELFTLRPLFPGASEADEIYKICSVIGSPTTESWTDGLKLARDLNFQFPQLAGVHLSGLIPSISDDAISLITSLCLWDPCKRPTAAEVLQHPFFQSCFYIPPSLRTKAVARTPPSCSVRGALDRQAVKRHSVALPDSKPTNIFSSSKLHPSLASGVQRKLDMANEDGVKNDKSLKTSRQPKYRPPGKDSPTSTNKVQNARRVSETTEKLANMSVGTRRWSLGQPLPPTTLKNRGNLVSESGNLVRPAQHVPTTRRTYTRKVTR* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1516 452 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
Lan6g1516 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Lan6g1516 452 MobiDBLite consensus disorder prediction 352 371 - -
Lan6g1516 452 CDD STKc_MAK_like 4 283 - -
Lan6g1516 452 PANTHER CYCLIN-DEPENDENT KINASE F-4-LIKE ISOFORM X1 1 419 - -
Lan6g1516 452 Gene3D Transferase(Phosphotransferase) domain 1 84 290 - -
Lan6g1516 452 ProSitePatterns Protein kinases ATP-binding region signature. 10 34 IPR017441 GO:0005524
Lan6g1516 452 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1516 452 MobiDBLite consensus disorder prediction 316 337 - -
Lan6g1516 452 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1516 452 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Lan6g1516 452 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1516 452 MobiDBLite consensus disorder prediction 352 423 - -
Lan6g1516 452 MobiDBLite consensus disorder prediction 375 423 - -
Lan6g1516 452 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1516 Lan-Chr6 22225306 22230545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1516 1 290 Core Cell Cycle Gene Families AT3G48750 35.354 3.11e-65 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Lan6g1516 Pkinase 2.9e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1516 K08829 - gmx:100810150 731.48