Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1508 ATGTTTAAAGGGTTTGGGATCCAAACATTAATTTCAGTATCCAAACAAGCTTCGAATCTCTTCCATTTTCTTTCTCTCTATTTTCCTTCCTTCCAATTTCCATCACTATCACTTTTCAATAATTCCCTCCTCATGAAATTTCACTTTCTTCTCTTTTTCCTTTCTCTCCTTTTTCTCTTAGTCTCGTTCTTTCTCAATTCCACCCATAAATCCGATGTAACCAATTCTCATATCTCTTCTCTCAATCAATATCGTTTCAATGAACTTTCTCGATCCCTTGTTCCTATTGCATCGTATCCTCCACGGGATTTAATTTTGGAGCCAGGTCATAAAGCTCTCCCTAGCAATAAGCCGACTACAGCACTGATTGCTACCCTAGATGGGACTATGTATATGGTGGACAGAGAAGAGAGTGGTTCCATGAAGGTGATATGGTCATTCCCAACAGGATCGCCAATCTACAATTCATACAAAGCTCCTATCAATAATGATAATGGTAAAGAAAATGCATCTGCAGCACTAATTAACGGGTTCGTGGAATGTGGGAAAGACTGGTCATTGTACATGCATGACAAGCATTTTGGCAAAATGAGAATCTCAGAAACCATTGCAGAATATGTAGCTCGTACGCCTACCTTTTCAGAGGATGGAGCGGTTACACTTGGATCCAAAAGAAGCACTTTGTTTGAAGTTGATGCTAAAACTGGAAGGATCATTCAAATGCATGCTATGTCTGATTTTGATAATTCTTCTATACCTTTGAGTGATGACAAACAAATTGTTCCAAATACGATCCATAGACAAAATAAGGAATTTTCTGATCCTGTGAAGCGAAATTCACCAGAGATGCTGCTCAAGATATTTAGGACAGATTATTCTCTTAAATCTGTTGGTCCTGATTCAGGAATTGTTTTGTGGACCATGACAGTAGCTGAATTTGAGGCTGTATTATTATGCCAACATACCTCATTTGATGCAGAGGATGAGTATGTTTCTGACAGGGGCCTAAATTTTGCAATGCCATGTCAAGAGATGCAGCAAGTTTTTCGCCTGCAAAAGAATTTTCTGTTAGAACCTTCAATTACTGAAAGATTACCTACAGATTATCATGAAAATGATATGCTCCCAATGCCTACCCCAGATTTGATGCTTCCTTCACAACCTAGTACTGATAGATTTTTGAATGGTCATGATGGTAATATGATGCTTCCTGTTCCTCTGCCAATTTCTCTGCCTTCTCCACAACCAGAATTCAGCAACTACGACAATAATAATAATAATGTAGATGTGCTCTCTCAGCCTCCTGTGGAATTTACTACACCAGAGAAAGTTTATCTGAACAGTATGAACAAATGGTCATTACCATTACTTTCTGTATTGTTTGCGGTTGTTTCTCTACTCATCTACTATGCTCCAGTGGTTAAAAATCAAGATATATTGAAGGGCCAAAACAATGAGTTTGAATTAAAAAATTCTCCTTCTAAGAGAAAGAAAACTCGTAAGTCCGGAAAGAACAATGGTACAGTTGGCAAAAAAGAAAAGAATATGTCATCAGAAAATGAGGATGCACTGATACAAAAGAATAACGATAAAGAAGCATGTCTCTTTAATCAAGTAGATGGGCGCATGGTTGGTAAACTATTCGTGTCAAATAAAGAAATTGCTAAGGGAAGCAATGGTACTATTGTCTTCGAAGGGATGTATGAAGAAGGTCGAGCAGTTGCTGTCAAACGTCTTGTCAGGGCTCATCATGATGTAGCCAGTAAAGAAATACAAAATCTCATTCTATCTGACCGTCATCCAAACATTGTTCGATGGCATGGAGTGGAATATGATCAAGATTTTGTTTACCTTGCTCTGGAACGTTGTACATACAGCTTGGATAATTTGATTTTCAAATGTTCGTTAAAGACCAAGATGGACACAAATAAGGATAATATGCAAGATCTTTGGAAAGCAAATGGTTATCCATCACCTCTATTACTGAAATTGATGAGGGATGTCATTTCTGGGATTGTTCATCTGCATGAACTAGGAATAATACATCGAGATTTGAAACCCCAAAATGTATTGATAATTGAGGGAAGATCTTTATCTGCAAAGCTTTCCGATATGGGCATTAGCAAACGCCTTCTTGAAAATATGTCTTCGTTAGCAAATAATGTTACCGGTGGTGGCAGTTCAGGTTGGCAAGCACCGGAACAGCTTGTTCAAGGACGTCAAACACGGGCTGTAGATTTATTTAGTTTAGGTTGTGTGCTCTTTTTCTGCTTGACTGGGGGAAGACATCCATTTGGAGAACAGCTTGAACGCGATGTCAATATCGTGAGGAATAAAATGGATCTATTCTTAGTGGAGTTCATTCCTGAAGCTGAGGATCTTATTTCTCGTTTGTTAAACCCTGACCCTGATCTAAGGCCAAAGGCAATTGAAGTGTTGCACCATCCTTTTTTCTGGAGTTCAGAGATGAGACTTTCATTTTTACGTGACACCAGTGACAGAGTGGAATTGGAAGATAGAGAGACTGATTCTGATATTTTGAAAGCATTAGAAAGCACTGCTGCAGTGGCCTTAGGTGTAAGATGGAATGAGAAGGTGGAATCTGCTTTCCTTAGTAACATTGGTCGTTTCCGGCGATATAAGTTTGACAGCGTCCGAGACTTGTTGCGGGTTATGAGAAACAAGCTAAATCATTATAGAGAACTACCTCATGAAATCCAGGAACTTGTAGGACCTATTCCTGAAGGATTCAATGACTACTTTGCTAGTCGATTCCCAAAACTGTTGATTGAAGTGTATAAAGTTATATGCAAATATTGCAAGGAAGAAGAATGTTTTCAGAGGTATTTTAGAAATGTTGATTAG 2865 0.3846 MFKGFGIQTLISVSKQASNLFHFLSLYFPSFQFPSLSLFNNSLLMKFHFLLFFLSLLFLLVSFFLNSTHKSDVTNSHISSLNQYRFNELSRSLVPIASYPPRDLILEPGHKALPSNKPTTALIATLDGTMYMVDREESGSMKVIWSFPTGSPIYNSYKAPINNDNGKENASAALINGFVECGKDWSLYMHDKHFGKMRISETIAEYVARTPTFSEDGAVTLGSKRSTLFEVDAKTGRIIQMHAMSDFDNSSIPLSDDKQIVPNTIHRQNKEFSDPVKRNSPEMLLKIFRTDYSLKSVGPDSGIVLWTMTVAEFEAVLLCQHTSFDAEDEYVSDRGLNFAMPCQEMQQVFRLQKNFLLEPSITERLPTDYHENDMLPMPTPDLMLPSQPSTDRFLNGHDGNMMLPVPLPISLPSPQPEFSNYDNNNNNVDVLSQPPVEFTTPEKVYLNSMNKWSLPLLSVLFAVVSLLIYYAPVVKNQDILKGQNNEFELKNSPSKRKKTRKSGKNNGTVGKKEKNMSSENEDALIQKNNDKEACLFNQVDGRMVGKLFVSNKEIAKGSNGTIVFEGMYEEGRAVAVKRLVRAHHDVASKEIQNLILSDRHPNIVRWHGVEYDQDFVYLALERCTYSLDNLIFKCSLKTKMDTNKDNMQDLWKANGYPSPLLLKLMRDVISGIVHLHELGIIHRDLKPQNVLIIEGRSLSAKLSDMGISKRLLENMSSLANNVTGGGSSGWQAPEQLVQGRQTRAVDLFSLGCVLFFCLTGGRHPFGEQLERDVNIVRNKMDLFLVEFIPEAEDLISRLLNPDPDLRPKAIEVLHHPFFWSSEMRLSFLRDTSDRVELEDRETDSDILKALESTAAVALGVRWNEKVESAFLSNIGRFRRYKFDSVRDLLRVMRNKLNHYRELPHEIQELVGPIPEGFNDYFASRFPKLLIEVYKVICKYCKEEECFQRYFRNVD* 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1508 954 SUPERFAMILY Protein kinase-like (PK-like) 535 832 IPR011009 -
Lan6g1508 954 Gene3D Phosphorylase Kinase; domain 1 536 621 - -
Lan6g1508 954 SMART PGNneu 883 937 - -
Lan6g1508 954 Gene3D Transferase(Phosphotransferase) domain 1 634 820 - -
Lan6g1508 954 PANTHER IRE1-RELATED 112 950 IPR045133 GO:0004521|GO:0004674|GO:0030968
Lan6g1508 954 Pfam Protein kinase domain 550 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1508 954 Pfam Ribonuclease 2-5A 824 950 IPR010513 GO:0004540|GO:0006397
Lan6g1508 954 Gene3D KEN domain 821 954 IPR038357 -
Lan6g1508 954 SMART serkin_6 548 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1508 954 MobiDBLite consensus disorder prediction 489 522 - -
Lan6g1508 954 PANTHER SERINE/THREONINE KINASE DOMAIN PROTEIN 112 950 - -
Lan6g1508 954 Gene3D - 112 328 IPR015943 GO:0005515
Lan6g1508 954 ProSiteProfiles KEN domain profile. 821 952 IPR010513 GO:0004540|GO:0006397
Lan6g1508 954 ProSiteProfiles Protein kinase domain profile. 548 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1508 954 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 92 259 IPR011047 -
Lan6g1508 954 CDD RNase_Ire1 822 950 - -
Lan6g1508 954 ProSitePatterns Serine/Threonine protein kinases active-site signature. 680 692 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1508 Lan-Chr6 22133526 22143140 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1508 554 817 MAP Kinase Kinase Kinase AT3G06030 25.899 3.65e-22 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Lan6g1508 Pkinase 1.3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1508 K08852 - gmx:100788389 1198.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1508 6 22133526 22143140 Lan6g1508 6 22133526 22143140 PCT