Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1498 ATGGGTTCATCACAAAAATGGTTAAGAATTGTTCGAAGAAAGTTCCTCAGATCATCCAATAAAGACATCATTCTACCTCGTACAAGTATTTGCACCAATCAAAGTGATGAAGCTATACTCAAGAAAGAAGCAATCACTATAGAAGATTTCAATTTGCCTACACAAACTTCCATCAAGAATTTCGTGGAGCATGTCGCTGCGGTTAAAATCCAAGCTCATTTTCGGGGTCATCTCGCAAGACGAGCATACGTAGCGCTTAAAAGTTTGGTGAAGCTACAAGCATTGGTTCGTGGGGTTTTCGTAAGGAAACAATCACAAATAGCGATGCAATGTATGAATGCAATTATTCGCTTGCAAGTAAGGGTTCGTGCAAGGCAGCTCTTAGGAAAGATTGATAATGAGTGA 405 0.3975 MGSSQKWLRIVRRKFLRSSNKDIILPRTSICTNQSDEAILKKEAITIEDFNLPTQTSIKNFVEHVAAVKIQAHFRGHLARRAYVALKSLVKLQALVRGVFVRKQSQIAMQCMNAIIRLQVRVRARQLLGKIDNE* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1498 134 Pfam IQ calmodulin-binding motif 87 104 IPR000048 GO:0005515
Lan6g1498 134 Pfam IQ calmodulin-binding motif 65 83 IPR000048 GO:0005515
Lan6g1498 134 SMART iq_5 62 84 IPR000048 GO:0005515
Lan6g1498 134 SMART iq_5 85 106 IPR000048 GO:0005515
Lan6g1498 134 Gene3D - 62 110 - -
Lan6g1498 134 ProSiteProfiles IQ motif profile. 63 91 IPR000048 GO:0005515
Lan6g1498 134 PANTHER IQ-DOMAIN 5-RELATED 2 130 - -
Lan6g1498 134 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 106 IPR027417 -
Lan6g1498 134 ProSiteProfiles IQ motif profile. 87 114 IPR000048 GO:0005515
Lan6g1498 134 PANTHER OS04G0561100 PROTEIN 2 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1498 Lan-Chr6 21865460 21866213 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1498 1 129 IQD Protein Family AT3G51380 49.612 2.16e-31 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1498 - - gmx:100788207 158.688