Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan6g1489 | ATGGGTTCCAATGAAATTGAAAGCTCTGGATCTGAGGTTGTCACAATTGATGTAAATGTTGCCAAGGGTCTGATTCAGAACGGTTATGTTTATCTAGATGTCAGGACAGTGGAAGAGTTTGAGAAAGGGCATGTGGATGCAGAGAAAATCATTAACATTCCATACATGTTCAACACACCAGAGGGGAGGGTGAAGAACCCAGAGTTTCTGAAGGAGGTTTTATCTGCTAGCAACAAAGAAGAACACCTCATTGTGGGTTGCCAAAGTGGGGTAAGATCTCTATATGCAACTGCTGATCTTTTGGCTGAAGGATTTAAGGATGTGAGCAACATGGGTGGAGGTTATTTGGATTGGGTTAAACATGATTTTCCTGTGAAAATACCTATAACAAATGAAAAGGAGTTATGA | 408 | 0.4069 | MGSNEIESSGSEVVTIDVNVAKGLIQNGYVYLDVRTVEEFEKGHVDAEKIINIPYMFNTPEGRVKNPEFLKEVLSASNKEEHLIVGCQSGVRSLYATADLLAEGFKDVSNMGGGYLDWVKHDFPVKIPITNEKEL* | 136 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan6g1489 | 135 | Gene3D | - | 3 | 127 | IPR036873 | - | |
| Lan6g1489 | 135 | ProSiteProfiles | Rhodanese domain profile. | 25 | 127 | IPR001763 | - | |
| Lan6g1489 | 135 | PANTHER | THIOSULFATE SULFURTRANSFERASE 18 | 8 | 129 | IPR044684 | GO:0003824 | |
| Lan6g1489 | 135 | PANTHER | THIOSULFATE SULFURTRANSFERASE 18 | 8 | 129 | - | - | |
| Lan6g1489 | 135 | CDD | RHOD | 20 | 119 | - | - | |
| Lan6g1489 | 135 | SMART | rhod_4 | 16 | 124 | IPR001763 | - | |
| Lan6g1489 | 135 | SUPERFAMILY | Rhodanese/Cell cycle control phosphatase | 12 | 125 | IPR036873 | - | |
| Lan6g1489 | 135 | Pfam | Rhodanese-like domain | 26 | 120 | IPR001763 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan6g1489 | Lan-Chr6 | 21753643 | 21757321 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lan6g1489 | 3 | 125 | Sulfurtransferasese or Rhodanese | AT5G66170 | 58.400 | 2.22e-51 | 157 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan6g1489 | - | K15692 | pvu:PHAVU_003G264200g | 221.09 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lan6g1489 | 6 | 21753643 | 21757321 | Lan6g1489 | 6 | 21753643 | 21757321 | ECH | |
| Lan6g0211 | 6 | 1594853 | 1611929 | Lan6g1489 | 6 | 21753643 | 21757321 | PCT | |
| Lan6g1489 | 6 | 21753643 | 21757321 | Lan6g1489 | 6 | 21753643 | 21757321 | PCT | |
| Lan6g1489 | 6 | 21753643 | 21757321 | Lan6g0211 | 6 | 1594853 | 1611929 | PCT |