Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1482 ATGTCATCGTCGAACAGACACGGTTACGGTGGCGGTGGTGGTGGTGGTGATGAGGTTAGGGCTTCTCACATATTAATCAAACACGAAGGTTCTAGAAGGAAGGCTTCATGGAAAGATCCAGAAGGACGTGTTATCAAGAACACTACTAGAGAGAACGCTGTTTCTCAACTCAAGGCACTGCAAGACGACATCGTTTCGGGAAAGGTTAAGTTTGAGGACGTTGCGGCTCGTTACTCCGATTGCAGCTCAGCTAAGCGTGGCGGCGATCTTGGTCCTTTTGGTCGTGGGCAGATGCAGAAGCCTTTTGAAGAAGCAGCTTTTGGTCTTAAAGTTGGTGAAATTAGTGACATTGTGGATACTGACAGTGGAGTCCACATAATAAAAAGAACAAATTGA 396 0.4646 MSSSNRHGYGGGGGGGDEVRASHILIKHEGSRRKASWKDPEGRVIKNTTRENAVSQLKALQDDIVSGKVKFEDVAARYSDCSSAKRGGDLGPFGRGQMQKPFEEAAFGLKVGEISDIVDTDSGVHIIKRTN* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1482 131 ProSitePatterns PpiC-type peptidyl-prolyl cis-trans isomerase signature. 71 91 IPR023058 -
Lan6g1482 131 Pfam PPIC-type PPIASE domain 23 130 IPR000297 GO:0003755
Lan6g1482 131 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 16 131 IPR000297 GO:0003755
Lan6g1482 131 Gene3D - 15 131 IPR046357 GO:0003755
Lan6g1482 131 MobiDBLite consensus disorder prediction 1 21 - -
Lan6g1482 131 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 8 130 - -
Lan6g1482 131 SUPERFAMILY FKBP-like 17 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1482 Lan-Chr6 21673007 21678165 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1482 49 128 Sulfurtransferasese or Rhodanese AT5G19370 36.250 6.09e-08 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1482 K09578 - gmx:100500451 220.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1482 6 21673007 21678165 Lan6g1482 6 21673007 21678165 ECH
Lan6g1482 6 21673007 21678165 Lan18g0119 18 939885 942406 LSH