Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1473 ATGTCACCGGGAACAACCAAGTCTCAACAATGGCAGTGGGAGAACGCCGTCGCTGGCTCCGCCGCAGGCTTCGCCACCGTCGCTGTTATGCATCCCCTTGACGTTGTCCGAACTAGGTTCCAAGTTAATGATGGTCGAGTCTCTCATCTCCCGAGTTATAGGAACACTGCTCACGCCGTTTTCACAATTGCTCGCTCCGAGGGCTTACGAGGTTTATATGCAGGTTTTCTTCCCGGGGTTCTCGGGTCTACTATTTCATGGGGTTTATATTTCTTCTTCTATGACAAAGCCAAACAAAGATATGCCCTGAACAGGGAGGAGAAATTGAGCCCAGGTCTTCATCTCGTCTCTGCTGCTGAAGCTGGAGGGTTGGTTTGCTTGTGCACAAATCCGGTTTGGTTGGTAAAGACAAGATTGCAGCTTCAGACTCCTCTTCATCAGACACGACCATATTCTGGACTTTATGATGCAGTTAGGACCATAATGAAGGAAGAAGGATTTAGTGCACTTTACAGAGGGATTGTTCCTGGTCTATTTCTGCAGGTCTCTCATGGTGCTATTCAGTTCACAGCATACGAGGAGCTTCGGAATGTTCTTGTTGATTTAAAGAATAAGAGAAGTAAAATACATCATCAAAACCCTGATAAACTGTTGAATTCTGTTGATTATGCGGTTCTTGGAGCAACATCAAAAATTGCTGCAATACTTATAACCTATCCATTTCAGGTTATACGGGCTCGATTGCAGCAACGACCCAGTGGCGGAGTTCAAAGATATACGGATAGTTGGCATGTTTTGAGGGAAACTGCAAGATTTGAAGGTGTTAGAGGTTTTTATAAGGGGATTACAGCAAACCTTTTAAAAAATGCTCCTGCTTCTTCAATAACATTTATTGTTTATGAAAATGTTCTAAAATTGCTTAAACTGACTAGAAAGAATGACTGA 945 0.4349 MSPGTTKSQQWQWENAVAGSAAGFATVAVMHPLDVVRTRFQVNDGRVSHLPSYRNTAHAVFTIARSEGLRGLYAGFLPGVLGSTISWGLYFFFYDKAKQRYALNREEKLSPGLHLVSAAEAGGLVCLCTNPVWLVKTRLQLQTPLHQTRPYSGLYDAVRTIMKEEGFSALYRGIVPGLFLQVSHGAIQFTAYEELRNVLVDLKNKRSKIHHQNPDKLLNSVDYAVLGATSKIAAILITYPFQVIRARLQQRPSGGVQRYTDSWHVLRETARFEGVRGFYKGITANLLKNAPASSITFIVYENVLKLLKLTRKND* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1473 314 SUPERFAMILY Mitochondrial carrier 12 302 IPR023395 -
Lan6g1473 314 Coils Coil 192 212 - -
Lan6g1473 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 198 IPR018108 -
Lan6g1473 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 100 IPR018108 -
Lan6g1473 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 218 306 IPR018108 -
Lan6g1473 314 Pfam Mitochondrial carrier protein 11 102 IPR018108 -
Lan6g1473 314 Pfam Mitochondrial carrier protein 221 308 IPR018108 -
Lan6g1473 314 Pfam Mitochondrial carrier protein 109 200 IPR018108 -
Lan6g1473 314 PANTHER BNAA09G07970D PROTEIN 10 309 - -
Lan6g1473 314 Gene3D Mitochondrial carrier domain 2 102 IPR023395 -
Lan6g1473 314 Gene3D Mitochondrial carrier domain 103 314 IPR023395 -
Lan6g1473 314 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 10 309 IPR044712 GO:0006862|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1473 Lan-Chr6 21585627 21591920 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1473 32 307 Chloroplast and Mitochondria Gene Families AT2G47490 37.102 6.14e-49 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1473 K15115 - gmx:100809599 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1473 6 21585627 21591920 Lan6g1473 6 21585627 21591920 ECH