Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1458 ATGTCTCAACAACCACTCTTACTCCACTTACCCCAAATACAAGAAGACACAGCCTACGACTCCTCCGAAAAAATCATCATAGTTGGAGCTGATGAATCCGATGATGAATCTAACTGTGGCCGTACCCCACCATTCTCATGGAAGAAGCTCTGGCTCTTTACAGGCCCCGGCTTCTTAATGAGCATCGCTTTTCTCGATCCAGGAAACCTCGAGGGTGACCTACAAGCAGGAGCTGTAGCTGGGTATTCCCTGTTATGGCTACTTATGTGGGCCACCCTCATGGGCCTTTTAATCCAGCTCCTGTCTGCTCGGCTAGGTGTCGCTACTGGGCGACACCTAGCCGAGCTTTGTAGGGAGGAATACCCGACATGGGCTGGAATAGTGTTGTGGGTTATGGCTGAGGTTGCTCTTATTGGGTCTGATATTCAAGAAGTTATTGGGAGTGCTATTGCTATTAGGATTCTTAGTAATGGGTTTGTGCCTCTTTGGTTTGGGGTTATCATTACAGCTCTTGATTGTTTTGTTTTTCTCTTTCTTGAGAACTATGGTGTGAGGAAATTGGAAGCTTTTTTTGCTGTCCTTATTGGTATCATGACACTCGCATTCGCGTGGATGTTTGGTGAAGCAAAGCCCAGTGGCAAGGAACTTCTTATCGGTATTTTGGTTCCGAAACTTAGTTCCAGAACTATACACCAGGCTGTTGGAGTTGTAGGCTGCATAATTATGCCTCACAATGTATTTTTGCATTCTGCTCTTGTTCAGTCAAGGCAAGTTGACCAAAGCAAGAAAGGCAGAGTTCAAGAAGCTCTCAATTATTACTCTATCGAATCCACCATTGCCCTTATAGTTTCTTTGGCCATTAATATATTCGTCACAACTGTGTTTGCTGGTGGTTTTTACGGTACTGAAGTAGCAAACAGTATTGGTCTTGCTAATGCAGGACACTATCTTCAGGAGAAGTATGGTGGTGGACTATTGCCGATATTATATATATGGGGTATCGGGTTATTAGCAGCTGGCCAAAGCAGCACTCTTACTGGTACTTATGCTGGACAATTTATCATGGGAGGTTTTCTAAATTTGAAGTTGAAAAAATGGATGAGGGCATTAATTACACGAAGTTGTGCAATCATCCCAACCATGATTGTTGCTCTTATTTTTGATACCTCGGAGGATGCATTAGATGTTCTGAATGAGTGGCTTAATGTTCTTCAGTCAGTCCAAATCCCCTTTGCACTTATTCCCCTGCTTTGTTTGGTGTCAAAGGAGCAGATAATGGGAAGTTTCAAAATCGGCCCTGTCCTCAAGATTATTTCATGGTTTGTGGCTGCTCTGTTGATAGTAATCAATGGCTATCTTTTGCTCGATTTCTTCTCTGCTGAAGTGAATGGAACAGTGGTCGCCACCGTGCTTTGCGCATTAACAGCTGCATATGTTGCATTCATAATATACCTTGTCTCAAGAGCCATTACCTTTTCACCATGGCAAAGTGTGATACAAAAGAAGACAATTTCTAACTCAGAGAATTGA 1530 0.432 MSQQPLLLHLPQIQEDTAYDSSEKIIIVGADESDDESNCGRTPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAVAGYSLLWLLMWATLMGLLIQLLSARLGVATGRHLAELCREEYPTWAGIVLWVMAEVALIGSDIQEVIGSAIAIRILSNGFVPLWFGVIITALDCFVFLFLENYGVRKLEAFFAVLIGIMTLAFAWMFGEAKPSGKELLIGILVPKLSSRTIHQAVGVVGCIIMPHNVFLHSALVQSRQVDQSKKGRVQEALNYYSIESTIALIVSLAINIFVTTVFAGGFYGTEVANSIGLANAGHYLQEKYGGGLLPILYIWGIGLLAAGQSSTLTGTYAGQFIMGGFLNLKLKKWMRALITRSCAIIPTMIVALIFDTSEDALDVLNEWLNVLQSVQIPFALIPLLCLVSKEQIMGSFKIGPVLKIISWFVAALLIVINGYLLLDFFSAEVNGTVVATVLCALTAAYVAFIIYLVSRAITFSPWQSVIQKKTISNSEN* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1458 509 PANTHER METAL TRANSPORTER NRAMP3 PROTEIN 12 508 - -
Lan6g1458 509 Hamap Divalent metal cation transporter MntH [mntH]. 33 458 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan6g1458 509 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 48 426 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan6g1458 509 Pfam Natural resistance-associated macrophage protein 71 432 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan6g1458 509 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 12 508 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan6g1458 509 PRINTS Natural resistance-associated macrophage protein signature 129 155 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan6g1458 509 PRINTS Natural resistance-associated macrophage protein signature 159 178 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan6g1458 509 PRINTS Natural resistance-associated macrophage protein signature 184 205 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan6g1458 509 PRINTS Natural resistance-associated macrophage protein signature 233 256 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan6g1458 509 PRINTS Natural resistance-associated macrophage protein signature 340 359 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan6g1458 509 PRINTS Natural resistance-associated macrophage protein signature 368 385 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan6g1458 509 PRINTS Natural resistance-associated macrophage protein signature 402 421 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1458 Lan-Chr6 20969780 20973498 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1458 24 495 Inorganic Solute Cotransporters AT2G23150 80.632 0.0 785
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1458 K21398 - gmx:100807811 845.884