LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan6g1451	ATGTCTCATCAACCACTCTTAAACTCACACCAACATGATGAACTTGAAGAAACAGCCTATGACAGCTCCGAAAAAGTTATTATTGTCGGAGATGACGAATTCGATGATGATTACAACTGGAGCCGGACCCCACCATTCTCATGGAAGAAGCTGTGGCTCTTTATGGGTCCTGGCTTCCTCATGAGTATAGCCTTTTTGGATCCAGGGAACCTCGAGGGTGACCTGCAAGCAGGTGCCATAGCAGGATATTCACTGCTATGGCTCCTCATAACGGCCACCCTCATGGGACTCTTGATCCAGCTTTTGTCTGCTCGGCTAGGTGTCACCACGGGGCGACATCTGGCTGAACATTGTAGGGAAGAATATCCTACATGGGCGAGGTTGGTGTTATGGGTTATGGCTGAGATTGCTCTTATTGGTTCTGATATTCAAGAGGTTATTGGGAGTGCTATTGCTATCAGAATTCTTACTAATGGGGCTGTGCCACTTTGGGCTGGGGTTGTTATTACAGCTTCTGATTGTTTTGTTTTTCTCTTTCTTGAGAACTATGGTGTGAGAAAATTGGAAGCATGTTTTGCTCTCCTCATTGGTATCATGGCCATTTCATTTGCATGGATGTTTGGTGAAGCAAAGCCCAATGGCAAGGAACTTCTTCTTGGTATTTTTGTTCCGAAACTTAGTTCCAAAACTATACACCAGGCTGTTGGAGTTGTAGGATGTATTATTATGCCTCACAATGTATTCTTGCATTCTGCTCTTGTACAATCAAGGGATGTTGACCGCAGCAAGAAAGGCCGAGTTCAAGAAGCTATTAATTATTATTCTATAGAGTCCACCCTTGCCCTTGTAGTCTCCTTGGTCATTAATATATTTGTCACAACTGTGTTTGCTAATGGGTTTTACGGCACTGACCTAGCACAGAATATCGGTCTCGTAAACGCAGGACAGTACCTCCAGGAGAAGTACGGTGGTGGACTGCTTCCAATATTGTATATATGGGGTATTGGGTTATTAGCAGCTGGCCAAAGTAGCACTCTTACTGGTACTTATGCTGGACAATTTATCATGGGAGGTTTTCTAAATTTGAAGTTGAAAAAATGGCTGAGGGCATTAATAACAAGAAGTTGTTCAATCCTCCCAACCATGATAATTGCACTTACATTTGATACCTCCGAGGATGCATTAGATGTTCTGAATGATTGGCTTAATGTTCTTCTGTCAGTCCAAATCCCGTTTGCGCTTATTCCTTTGCTTTGTTTGGTGTCAAAGGAACAGATAATGGGAACTTTCAAAATCGGCCCTGTCCTCAAGATTATTTCATGGCTTGTGGCTGCTCTGTTGATAGTGATCAATGGCTATCTTTTAGTGGAATTCTTCTCTGCTGAAGTGAATGGAGCAGTAGTTGCCACCATACTATGTATAGTAACAGCTGCATATGTTGCATTCATAATATACCTCGCCGCGAGAGCGATTACGTTTTCATCTTGGAAAAGTGTACCACAAGAGAAGACAGAATCATCAGACCTTAAAACCGTGATATAG	1542	0.428	MSHQPLLNSHQHDELEETAYDSSEKVIIVGDDEFDDDYNWSRTPPFSWKKLWLFMGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLITATLMGLLIQLLSARLGVTTGRHLAEHCREEYPTWARLVLWVMAEIALIGSDIQEVIGSAIAIRILTNGAVPLWAGVVITASDCFVFLFLENYGVRKLEACFALLIGIMAISFAWMFGEAKPNGKELLLGIFVPKLSSKTIHQAVGVVGCIIMPHNVFLHSALVQSRDVDRSKKGRVQEAINYYSIESTLALVVSLVINIFVTTVFANGFYGTDLAQNIGLVNAGQYLQEKYGGGLLPILYIWGIGLLAAGQSSTLTGTYAGQFIMGGFLNLKLKKWLRALITRSCSILPTMIIALTFDTSEDALDVLNDWLNVLLSVQIPFALIPLLCLVSKEQIMGTFKIGPVLKIISWLVAALLIVINGYLLVEFFSAEVNGAVVATILCIVTAAYVAFIIYLAARAITFSSWKSVPQEKTESSDLKTVI*	514

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan6g1451	513	Hamap	Divalent metal cation transporter MntH [mntH].	41	459	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Lan6g1451	513	PANTHER	METAL TRANSPORTER NRAMP3 PROTEIN	11	505	-	-
	Lan6g1451	513	Pfam	Natural resistance-associated macrophage protein	72	433	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Lan6g1451	513	PRINTS	Natural resistance-associated macrophage protein signature	130	156	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Lan6g1451	513	PRINTS	Natural resistance-associated macrophage protein signature	160	179	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Lan6g1451	513	PRINTS	Natural resistance-associated macrophage protein signature	185	206	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Lan6g1451	513	PRINTS	Natural resistance-associated macrophage protein signature	234	257	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Lan6g1451	513	PRINTS	Natural resistance-associated macrophage protein signature	341	360	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Lan6g1451	513	PRINTS	Natural resistance-associated macrophage protein signature	369	386	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Lan6g1451	513	PRINTS	Natural resistance-associated macrophage protein signature	403	422	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Lan6g1451	513	PANTHER	SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER	11	505	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Lan6g1451	513	TIGRFAM	nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family	49	427	IPR001046	GO:0016020\|GO:0030001\|GO:0046873

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan6g1451	Lan-Chr6	20370583	20374372	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan6g1451	25	508	Inorganic Solute Cotransporters	AT2G23150	76.591	0.0	759

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan6g1451	K21398		-	gmx:547711	823.928

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan6g1451	6	20370583	20374372	Lan6g1451	6	20370583	20374372	PCT