Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1434 ATGGCCGTTGATTTCATGATGAGTGGTTTCAACACTTTCACTTCCAAAACAGAAGAACATGCGGTTCAAGAAGCTGCCTCCGGTTTAGAAAGTGTTGAAAAACTCATTCACTTACTCTCTCATACACAACAACAACACCACTCTTCTTCTTCTAATTCGAATCTAAACCCAAACCTTGACATAATAGATAGAGATTATAAAGCCGTAGCAGACGTCGCCGTTTCGAAGTTCAAAAAAGTGATTTCTCTTTTGGGCCGAACCCAAACCCGAACCGGTCACGCCCGGTTCAGAAGAGCACCTTTGATTCAAAGTGAAAAAGAAGAAGAACATGTTTCTGGAACTGAACCTTCTAGAATCTTCTATGCTACTCCGTTGCAGCAGATCCCATCCACCACTACCATTCATCATCATCATCATCATCAATCTTTGATCTCAAGAAATGGAATCACTGAGAAGAAGGATTCATCTTCTAAGATCATTACTTTCTCTTCTTATAATAATAGTGATTCCTCTGCTCCAAATTCGTTTATTTCATCTTTAACCGGTGATGCTGACACCAAGCAACAACCGTCGCCGGCGGCGACGGCGCCGGTAGGGTTTCAGATCACGAATCTTTCTCAGGTTTCTTCGGCGGGGAAGCCTCCGCTTCCATCTTCGTCGTTGAAGAGGAAGTGTAGTTCTGAGACTTTGGGTTCTGGAAAGTGTGGTAGCTCCTCTAGCCGCTGTCATTGTTCAAAAAAGAGCAGAAAAATGAGGGTGAAGAAGGTGATGAGAGTGCCAGCTATAAGTTTGAAGTTGGCTGATATTCCACCAGATGATTATTCATGGAGGAAATATGGACAGAAACCTATTAAAGGTTCTCCTCATCCAAGGGGTTACTATAAGTGCAGCAGTGTAAGAGGGTGTCCAGCAAGAAAACATGTAGAGAGAGCTTTGGATGATTCATCTATGCTGATAGTTACCTATGAAGGAGAGCACAACCATACTTTTTCTGCAGCTGATGCTACTAATCTCATTCTAGAATCTTCTTAA 1032 0.4254 MAVDFMMSGFNTFTSKTEEHAVQEAASGLESVEKLIHLLSHTQQQHHSSSSNSNLNPNLDIIDRDYKAVADVAVSKFKKVISLLGRTQTRTGHARFRRAPLIQSEKEEEHVSGTEPSRIFYATPLQQIPSTTTIHHHHHHQSLISRNGITEKKDSSSKIITFSSYNNSDSSAPNSFISSLTGDADTKQQPSPAATAPVGFQITNLSQVSSAGKPPLPSSSLKRKCSSETLGSGKCGSSSSRCHCSKKSRKMRVKKVMRVPAISLKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDSSMLIVTYEGEHNHTFSAADATNLILESS* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1434 343 Pfam WRKY DNA -binding domain 272 328 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan6g1434 343 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 14 343 IPR044810 GO:0003700
Lan6g1434 343 MobiDBLite consensus disorder prediction 208 238 - -
Lan6g1434 343 SMART WRKY_cls 270 330 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan6g1434 343 SUPERFAMILY WRKY DNA-binding domain 268 330 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan6g1434 343 PANTHER WRKY TRANSCRIPTION FACTOR 7-RELATED 14 343 - -
Lan6g1434 343 Pfam Plant zinc cluster domain 222 268 IPR018872 -
Lan6g1434 343 Gene3D WRKY domain 259 330 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan6g1434 343 MobiDBLite consensus disorder prediction 163 195 - -
Lan6g1434 343 ProSiteProfiles WRKY domain profile. 265 331 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1434 Lan-Chr6 19636578 19638769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1434 1 328 WRKY Transcription Factor Family AT2G24570 42.733 3.03e-72 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan6g1434 WRKY 9.6e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1434 - - lang:109350121 612.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1434 6 19636578 19638769 Lan18g0997 18 15032237 15033903 PCT