Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1430 ATGGACCTTAAGTTAGACTCTGCTGACCATAAGGTTTTGGTTGATATTATAAAATTGGCACAAAAAAGAGGCCTCAAGGGTAAACTAGGAGGATGGAAAGAATTCCTGAACAGTTATGACAAAAAGTTCGGGGATGGTGTAAGTGATCCAGCAAAGAGGCCCGTCGAAACCTTGGCAGCATTTCTAAAGACATTTTCAAATAAGGATGATTTGAAGTTTTTTGATAACATCATGCGGCATCATTCAAATCAAAACATGGTGGAGAAACTAAAAGATAGCTCACATGAATCCCCGGAGCAGAGGTTAGTTGAGGCAACTCTCCAACACCCATTATATCCACTGGATTATTCATTTTCATCGATTGATGAGGGATGGATAATTATAAATGTTAAGAAAAAGGGAAAGGTGATGAGATCTACTGCAATGATGGCTCTTGATTGTGAAATGGTTCTCTGTGAAGATGGCACCGAAGCATTAGTGAAAGTCTGTGTTGTAGACCACAATCTAGAGGTCAAACTAAATGAACTTGTAAACCCCAAGAAACCAGTTGCAGACTACAGAACAGAGATTACTGGTGTTTCTTCTCAAGATTTGGAGGCAGTGACTTGCACCTTGGCAAATATACAGAAATCCATGAAGAGGTTGTTATACAATGGAGCCATATTAGTGGGACACAGTTTACATAATGACCTATGTGCAATGAAGATAGATTATGTTAGAGTGGTTGACACTTCATATATCTTCCAATCACCAGACTGGTCTATTCACAGGAGACCTTCGTTGAATAGTTTATGCAAGTCTGTGTTAGGCTATGAAGTTCGGGAAAAGGGTGCTCCACATAATTGTCTAGATGATGCATGTGCAGCTATGAAACTTGCTCTTGCAAAGATCAAGCATGGCGTTGACAAACAATTTACATTGGTTGAAGAACCTGTTCCTGAAAGTGAGCTGGCAAAACTTCTTATTCACAAGATACAAAACACCGTGAACAGTGAAACACTACATAAACTTGTTCCTGGAGACTTCACAATAGAACTGAAGCCCTCCAGGAACGGCAAAGGAGATAAATATTCTGCACTTGCTATCTTTAAGAACCCACAAGAGGCATGTGATGCCTACGAAAAAGTGCAAGGTGACGAATTACAGGATTCATTTGGACGTCCGCAGAAACTTGTCACATTTCAGCTAAGTACAGGCAGGACTTCCAATCTATTTGTTCGAAAAATGGCAACCGATGAGCCCCATAACACAATTCCAGCACAGAAGAGAGCTTTAGAAGAAGATGAGGCTGCTGTTAATGTTTCCAAGAAATCAAAGACAGATCCTAAGACAGAAGAGGAGGGTGATGCCCTGAAAGGCTCAAAAGTAAAGATGGAACCTAAAATAGAAGAGGATGCCCCGAAAGACTCAAATAAGTGCAATACTGACACCCCCTCGAATGAGATCGAAGCACTGAATCAACGATTGAAGCAAAATGATTTGGAGCTTGAATCATTAAGGAAACAGTTGAAACAAAAAGATTTTGAAATTACCATGCTGCACAAAATGGTAGCTTCCTTGAAAAAGAAAAAAAGCAAATAG 1581 0.3997 MDLKLDSADHKVLVDIIKLAQKRGLKGKLGGWKEFLNSYDKKFGDGVSDPAKRPVETLAAFLKTFSNKDDLKFFDNIMRHHSNQNMVEKLKDSSHESPEQRLVEATLQHPLYPLDYSFSSIDEGWIIINVKKKGKVMRSTAMMALDCEMVLCEDGTEALVKVCVVDHNLEVKLNELVNPKKPVADYRTEITGVSSQDLEAVTCTLANIQKSMKRLLYNGAILVGHSLHNDLCAMKIDYVRVVDTSYIFQSPDWSIHRRPSLNSLCKSVLGYEVREKGAPHNCLDDACAAMKLALAKIKHGVDKQFTLVEEPVPESELAKLLIHKIQNTVNSETLHKLVPGDFTIELKPSRNGKGDKYSALAIFKNPQEACDAYEKVQGDELQDSFGRPQKLVTFQLSTGRTSNLFVRKMATDEPHNTIPAQKRALEEDEAAVNVSKKSKTDPKTEEEGDALKGSKVKMEPKIEEDAPKDSNKCNTDTPSNEIEALNQRLKQNDLELESLRKQLKQKDFEITMLHKMVASLKKKKSK* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1430 526 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 11 436 - -
Lan6g1430 526 Pfam Exonuclease 144 292 IPR013520 -
Lan6g1430 526 SMART exoiiiendus 141 302 IPR013520 -
Lan6g1430 526 Coils Coil 482 506 - -
Lan6g1430 526 MobiDBLite consensus disorder prediction 424 471 - -
Lan6g1430 526 MobiDBLite consensus disorder prediction 424 480 - -
Lan6g1430 526 Gene3D - 137 310 IPR036397 GO:0003676
Lan6g1430 526 PANTHER SMALL RNA DEGRADING NUCLEASE 2 11 436 - -
Lan6g1430 526 CDD REX1_like 144 294 IPR034922 -
Lan6g1430 526 SUPERFAMILY Ribonuclease H-like 144 298 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1430 Lan-Chr6 19488161 19493477 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1430 143 292 C2H2 Transcription Factor Family AT2G48100 32.941 9.15e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1430 K14570 - gmx:100785565 706.827