Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1426 ATGACCCTCCAAAACACTCTCCTCCACTTTCTTCTTCCCCTTCTCCTTACCTTTAACCTATGCTATGGCCTAACTAAGGACGGTGTCCTATTACTTTCTTTCAAATACGCCGTTTTAAGTGACCCAAACTATGTGCTATCAAATTGGAACTACAATGATACCACACCCTGTTCCTGGAACGGCGTCGTATGTTCCTCAATTTTAACCTCAACAAACACAACACCTAGTGTAACTTCATTATCTCTTCCAAATTCTCACCTTATAGGTTCAATTCCCTCTGATCTAGGTTTAATTGAAAATCTTCAAGTTCTAGACCTTTCTAATAACTCACTCAACGGTTCTCTACCTTCATCATTTTGTCAACCTTCTTCGCAACTTCGGTTACTTAACTTGTCTAGTAACTTAATTACCGGAGAGGTTCCTGATTCCATAACTCAGCTTAGGTTTCTTGAAATTCTTAACCTTTCAGACAATTCCTTGGTGGGAAAAGTGCCAGATAATTTATCTAACTTGCAAAACCTAAGTGTTGTTAGTTTGAGAAATAATTATCTCTCGGGTTTTCTACCCAACGGGCTTCGGAAGTTGCAAGTGTTGGATCTCTCTTTCAACTTGTTGAACGGAACACTTCCGTTGAATTTCGATGGTGATAGTATTAGTTACTTAAACATTTCTTATAACCGTTTTTCCGGTAACATATCACCGGAGTTTGCTGCGAGAATTCCGGTGAATGCTACCGTTGATTTCTCGTTCAACAATCTCACTGGTGAGATCCCGCGTGAGATTGTTTTTTTGAACCAGGAAGAGGAGTGTTTTGGTGGGAACATTGGTTTGTGTGGTGAACCAACGAAGAAACCATGTCCTATTCCTTCTTCACCTACTTCTTCTCCTGCAATCGCTGCGATTCCAAAAACTTTCGATGATGATGATGATGATTCGATGTCACCAAACGGATCTTACGAGCTGAAACAACAAAACGGTGGTATTAGGAGCGGAACTGTTATAGGAATTGTAGTTGGTGACGTTGTAGGCATTGGAATCTTAGCAATGATTTTTGTGTACTTATACAAGAGAAAGAAAGAAGAGAATGCAATAAAGAATGAAGTTGAAGTAGAACATTCAGATAGTGTCAAGAGTTCTTCATCGACAACCTCGGAAACAAGAAGGTTTACGAGGTGGTCGTGTTTGCGAAAAAGAACAGAAGAAGAGTCATCATCAGATGCAACAGTTTCATCTGATAGTGATGTAGAAGCTGCAAAAGATGTGCAGAATTACCAAAAGGGGCATGAAGATCAGAAACAAATACAAAATAAAACGGGTACTTTGGTAACTGTGGATGGTGAAAAAGAGCTTGAGGTTGAAACACTTTTAAAAGCTTCAGCGTATATATTAGGTGCAACTGGTTCAAGTATAATGTATAAGGCGGTGCTTGAAGATGGAACTTCTTTAGCGGTTCGAAGAATTGGTGAGAGTGGTGTGGAACGGTTCAAGGATTTTGAGAATCAAGTAAAGGTTGTGGCTAAATTGGTTCACCCGAATTTAGTTCGAATTCGTGGGTTCTATTGGGGACATGATGAGAAGCTTATCATCTATGATTTTGTTCCAAATGGGTGTCTTGCTAATGTTCGTTACAGGAAAGTGGGCTCCTCCCCTAGTCATTTGCCATGGGAGGCTCGGCTAAAGATAGCGAAAGGGGTGGCACGTGGACTAGCTTACCTCCACGAGAAGAAGCACGTGCATGGAAACTTGAAGCCAAGCAATATTCTATTATGCAACGACATGGAGCCCAAGATTGGAGACTTCGGCCTTGAAAAGATTGTGACTGGAGACACTAGTTATAAAGCTGGAGGATCAGCACGCATATTTGGGAGTAAGAGATCCACGGCCTCACGTGATAGCTTCCAAGACATGACTTTCGGCCCAAGCCCAAGCCCGAGCCCGAGCTCCATAGGTGGTGTGTCTCCTTATAATGCACCTGAGTCACTCAGGAACCTGAAGCCTCACCCAAAGTGGGATGTGTATTCTTTTGGGGTCATCTTTCTTGAATTGCTAACGGGTAAGGTTGTGATTTTGGATGACATGGGCCAAGGGCCCGGGCTTTTGGTTGAAGATAAGAGTCGGGCCTTGCGGATGGCTGATGTGGCAATTCGATGTGAGATGGAGGGTAAGGAGGAGGGCCTTTTGGCATGCTTCAAGTTAGGGTATAGTTGTGTGTCTAATGTTCCACAGAAAAGGCCTTCGATGAAAGAGGTGTTGCAAGTTCTGGATAAGATACCGTTATCATCTTATTCGTTGTCATGCTATTATTAA 2307 0.4226 MTLQNTLLHFLLPLLLTFNLCYGLTKDGVLLLSFKYAVLSDPNYVLSNWNYNDTTPCSWNGVVCSSILTSTNTTPSVTSLSLPNSHLIGSIPSDLGLIENLQVLDLSNNSLNGSLPSSFCQPSSQLRLLNLSSNLITGEVPDSITQLRFLEILNLSDNSLVGKVPDNLSNLQNLSVVSLRNNYLSGFLPNGLRKLQVLDLSFNLLNGTLPLNFDGDSISYLNISYNRFSGNISPEFAARIPVNATVDFSFNNLTGEIPREIVFLNQEEECFGGNIGLCGEPTKKPCPIPSSPTSSPAIAAIPKTFDDDDDDSMSPNGSYELKQQNGGIRSGTVIGIVVGDVVGIGILAMIFVYLYKRKKEENAIKNEVEVEHSDSVKSSSSTTSETRRFTRWSCLRKRTEEESSSDATVSSDSDVEAAKDVQNYQKGHEDQKQIQNKTGTLVTVDGEKELEVETLLKASAYILGATGSSIMYKAVLEDGTSLAVRRIGESGVERFKDFENQVKVVAKLVHPNLVRIRGFYWGHDEKLIIYDFVPNGCLANVRYRKVGSSPSHLPWEARLKIAKGVARGLAYLHEKKHVHGNLKPSNILLCNDMEPKIGDFGLEKIVTGDTSYKAGGSARIFGSKRSTASRDSFQDMTFGPSPSPSPSSIGGVSPYNAPESLRNLKPHPKWDVYSFGVIFLELLTGKVVILDDMGQGPGLLVEDKSRALRMADVAIRCEMEGKEEGLLACFKLGYSCVSNVPQKRPSMKEVLQVLDKIPLSSYSLSCYY* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1426 768 Gene3D Transferase(Phosphotransferase) domain 1 534 763 - -
Lan6g1426 768 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 9 758 - -
Lan6g1426 768 Gene3D Phosphorylase Kinase; domain 1 413 532 - -
Lan6g1426 768 MobiDBLite consensus disorder prediction 287 324 - -
Lan6g1426 768 MobiDBLite consensus disorder prediction 625 654 - -
Lan6g1426 768 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Lan6g1426 768 SMART LRR_typ_2 147 171 IPR003591 -
Lan6g1426 768 SMART LRR_typ_2 98 122 IPR003591 -
Lan6g1426 768 SMART LRR_typ_2 192 215 IPR003591 -
Lan6g1426 768 PANTHER BNAC07G16060D PROTEIN 9 758 - -
Lan6g1426 768 SUPERFAMILY Protein kinase-like (PK-like) 462 758 IPR011009 -
Lan6g1426 768 Gene3D Ribonuclease Inhibitor 25 190 IPR032675 -
Lan6g1426 768 Gene3D Ribonuclease Inhibitor 191 288 IPR032675 -
Lan6g1426 768 SUPERFAMILY L domain-like 27 281 - -
Lan6g1426 768 Pfam Protein kinase domain 463 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1426 768 Pfam Leucine Rich Repeat 150 171 IPR001611 GO:0005515
Lan6g1426 768 Pfam Leucine Rich Repeat 100 120 IPR001611 GO:0005515
Lan6g1426 768 PRINTS Leucine-rich repeat signature 101 114 - -
Lan6g1426 768 PRINTS Leucine-rich repeat signature 192 205 - -
Lan6g1426 768 ProSiteProfiles Leucine-rich repeat profile. 100 122 IPR001611 GO:0005515
Lan6g1426 768 CDD STKc_IRAK 463 757 - -
Lan6g1426 768 ProSiteProfiles Protein kinase domain profile. 457 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1426 Lan-Chr6 19316070 19319930 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1426 23 757 Receptor kinase-like Gene Family AT4G37250 58.201 0.0 804
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan6g1426 Pkinase 3.6e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1426 - - gmx:100776204 1006.9