Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1423 ATGGAAGCCACAAGGGTCATATCCACCACTACAATCAAAGCACCTAGTGACAACAACAATACTAACCCAACTCCTAAAATCCATTTAACCCCATGGGATCTCGCTTTTCTACCAATTGAAGCCATTCAAAAGGGCCTTCTCTTTCACAACCCCAACAACGAAGAAAAACAAGACATATCAATCCAAATCCAACACCTCAAAAACACACTATCCACCACTCTTTCTTTCTTTCCACTTCTTACTGGTCGTTTTGACATCATCCATAATGAACATGAAGACAATAAAAATGCCTCATGTTACATCCTTTGCAACAACTCAGGTGTTTTGTTTGTCCATGCTGTAGCAGAAAATACAAGTGTTGCTCATATTCTTGAATCCAAATATGTTCCTTCAATTGTTCACTCTTTCTTCCCTCTCAATGGTGTCAAAAACTATGAAGCTACGTCACAGCCATTGCTAGCAATTCAAGTCACTGAGTTAATTGATGGTATCTTCATTGGTTGTACTTTGAACCATGCAGCTGCAGACGGCAAGTCGTTTTGGCATTTCATGAATTCATGGGCTGAAATTTCACGTGGTAATAATAAGATATCAAAACTCCCATCATTTCAGCGTTTCTTTTATGATACTACTGACCAACCCATTAGATTTCCTTTTACAAAAGAAGATGAAACTTATTCCGAAAACTCGAGTCCATTATCGGAGAGGATCTTCCATTTCTCAAAGGAGGAAATTGTGAAACTCAAATCGGAAGCAAATGAAGAAGCTAATACTGATAAATTATCTTCCCTGCAAGCACTTTTATCTCACGTTTGGAAATCTGTGTTCAGATTCAAACATGTTGATCCAGAAGAAGAGATACGTTACATTTTGATAATAGGTGTTAGACCAAGAATGGTTCCACAACTGGAAGAAGACTATTTTGGAAATGCAGGAATGATTTGTGCTGTGACTATGAAAGCAAGAGAAGTTCTTGAAAGTGGGGTTGGAAAGGTTGCTTTGGAAATGAACAAGGTGATTTCTTCTTACACAGGAGATAATATTAAGAGTCAGTATGAGTATTGGGTTAGAAAGCCAACGTTTCTTAGTCTTGTTAATGTGGATAGCACTAATAATTTGGCTACTAGTAGTTCCCCAAGGTTCAATGTTTATGGAAATGATTTTGGTTGGGGAAAGCCCGTGGCTGTTAGAAGTGGATCTGCAAATAAAAAGAATGGAAAGATTACTGTGTATGAAGGTGCAGAAAAAGGTAGCATTGACATTGAACTATGTCTTCCCTATGAGATTTTGGAGGCCTTGGGTAATGATCCTTACTTCATGAATACCATTCCAAGGTTGAAGGAAAAAAATTCAGTTCAGTAA 1362 0.3789 MEATRVISTTTIKAPSDNNNTNPTPKIHLTPWDLAFLPIEAIQKGLLFHNPNNEEKQDISIQIQHLKNTLSTTLSFFPLLTGRFDIIHNEHEDNKNASCYILCNNSGVLFVHAVAENTSVAHILESKYVPSIVHSFFPLNGVKNYEATSQPLLAIQVTELIDGIFIGCTLNHAAADGKSFWHFMNSWAEISRGNNKISKLPSFQRFFYDTTDQPIRFPFTKEDETYSENSSPLSERIFHFSKEEIVKLKSEANEEANTDKLSSLQALLSHVWKSVFRFKHVDPEEEIRYILIIGVRPRMVPQLEEDYFGNAGMICAVTMKAREVLESGVGKVALEMNKVISSYTGDNIKSQYEYWVRKPTFLSLVNVDSTNNLATSSSPRFNVYGNDFGWGKPVAVRSGSANKKNGKITVYEGAEKGSIDIELCLPYEILEALGNDPYFMNTIPRLKEKNSVQ* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1423 453 MobiDBLite consensus disorder prediction 1 24 - -
Lan6g1423 453 Gene3D - 218 435 IPR023213 -
Lan6g1423 453 Gene3D - 3 215 IPR023213 -
Lan6g1423 453 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 4 442 - -
Lan6g1423 453 Pfam Transferase family 6 439 - -
Lan6g1423 453 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 4 442 - -
Lan6g1423 453 Coils Coil 443 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1423 Lan-Chr6 19193107 19194700 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1423 64 428 Monolignol Biosynthesis Gene Families AT5G48930 26.598 1.78e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1423 - - adu:107480292 539.265