Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1422 ATGATAATAATGACTCAACAACAACAATATTTGATATATAACTGCATATTGCTGCGGACAAAGATAGCGCAGACCACAATTCCCACACTTAAAGATGTATTATTAGTTATTGATTCTTTAAAAAAACATGTTGCTACAAATCGGTTGATGTCCATACAGAAAAGAGTGGAAGAAAATCGACAAAAGTTAGTTGGTCTCACAGACAATCTTTTTAAAAAATCAAAGGAAATAAGAAGCACAAGTAGCTTTAGTAATACACATAGAAGTCTGGACTTACTGACAAAGAGGCAAAAGGATGCAATTGATGCGCACAATGGCTTTCAAAGAAGTAATGGAGGTAAGGAGAGCAGTGGTTATCAGGAAGATAGTCGTGGTTGTAAAGCAGTTCTTGTAAGTTATGATGCTCCTGACCCGAATTCTATTGTGACTATTATGTTACCTCAAATTGAGAGAATACCTACTTACACTACATGGCTTTTTCTAGACAGAAATGAACTAATGACAGAGTCTGTGGAAGGTCGAAGGCAAATATATTATGATCGCAATTGTGGAGAAACACTTATTTGCAGTGATAGTGAGGAGGATATGCCAAATGAAGAAGAGGAAAAAAGAGATTTCATTAAATCAGAAGATTTTATACTATGCATGACTATCAAAGAACTTGGTTTGTCTGATATTGTTCTGGAGTCACTGGGTCAATGTTTTTCTAGAGATGCGACTGGAGTCAAGGAAAGGTATGAAACTCTTAGTAATAAAGACAATGCAGCTGGTGGTTCTAAGACAAGAGATATCGAAGGGAATTTCCAAAGTGGAAATTTATTTTTGGAAAAAGATTTGGGAGAAGTTCTTGGATCTTTTGACAACCTATTTTGCCGACGATGTCATGATTTTGTTTGCAGATTACATGGATGTAATCAGGATCTTGTATTCCCTGCTGATAAGCAAACTCCGTGGAGTCCTCCTGATAGCACAAATGCACCATGTGGGCCAAACTGTTTTCGATTGGTACTTAACTCAGAAATATTTGCCAGAGCGACCTCTTCTTCCCAAGCTAATGTCATAGAGAGTCACTCTGGTGATGTGGGGGAGCAAATGTTATCTAAGAAGTTTAGTGGTGTATTTGCTAAAAGGCAGAAAAAATGCAGCAAAAGTGAAAGTGCTTCATCTAATGCAAAGAGCATATATGAGAGTAGTGGCTCAGGAAATGGTCCTATACAGGACATCGCTTCATCTTCCCACTCCATATTGCCTAAAATTAGATCTATGAAGAAAGGTGGAATTGGTAAGACAAACAGTAAGCGTGTGGTGGACTGCGTTCTTGTTTCCATGCAGAAGCGGCAAAATAAAGCAATGACATCTAATTCCAATTCCACTGGTGAAGGTCTTGATCGTTCATCAAACAAGATAGATAAGAACTCTCCCATCATTAGCAGTGAGGACATGGGGAAAGAGTTTGTACATGAGAAGGATTGTCAACTGAAATTCACTGATGATGAATCTTGGAAACCTCTTGAAAAAGGGCTTCTAGATAAAGGAATGCAGATTTTTGGTAGAAACAGCTGCTTAATAGCCAGGAATATGTTAAATGGTCTAAAGACATGTTGGGAGGTTTACCAATACATTGATTACAAAGAGGGGAAGATGTCAGTTCCTAATGGTGATGCTCCAAGTTCTCCTTTGGAAGTCTATTTCAAGGGCAATAAAAAAGTGAGACGGAGATCAAAATTTTTACGTAGAAGAGGAAGAGTTGGTCGCTTAAGATATACCTGGAAATCTACTGCTTATCGTACAAATAGGAAAAGGATTACAGAGAGAAAAGATCAACTCTACAAGCAGTATAATCCATGTGGTTGCCAATCAGCTTGTGTAAAGCAGTGTCCTTGTCGTGAAAATGGAACCTATTGTGAGAAGTACTGTGGATGTCCTGATAGTTGCAAGATTCGATTTCGTGGATGTCGTTGTGCTAAGAGTCAATGCCAAAGTCGACAATGCCCATGCTTTGCTGCACAACGGGAATGTGATCCTGATGTTTGTAGGAATTGTTGGGTCGGTTGTGGTGATGGTACTCTTGGGATTCCTGGCCAAAGAGGTGATAATGAGTGTCGAAATATGCAGTTTCTTCTCAGACAACAACGAAGGATTCTTCTTGCAAAGTCTGATGTACATGGCTGGGGAGCCTTCTTAAAGGATAAAGTTGAGAAGAATGAATTCCTTGGAGAGTATACTGGGGAGTTAATTTCACACCGGGAAGCCGATAAGAGAGGAAAGATATACGACCGTGAAAATTCAACATTTCTCTTTAATTTGAATGATCAGTTTGTTGTCGATGCTCATCGGAAGGGTAACAAATTGAAGTTTGCTAATCATTCTCCTCATCCAAATTGCCATGCAAAGGTTGTTATGGTTGCTGGAGATCATAGGGTAGGCATTTTTGCTACGGATCGGATTGCCGCCGGGGAGGAAATATTTTATAATTATCGATTTGCGCCAGAGTGCACTCCTGACTGGGTTCGAAAGCTTGAGGCATCTGGATCAAAAAAAGAGAATGGTGCTTCTTCAAGTGGTCGTGCAGGTCGTGCGAAGAAAAGTGCTTAA 2595 0.3946 MIIMTQQQQYLIYNCILLRTKIAQTTIPTLKDVLLVIDSLKKHVATNRLMSIQKRVEENRQKLVGLTDNLFKKSKEIRSTSSFSNTHRSLDLLTKRQKDAIDAHNGFQRSNGGKESSGYQEDSRGCKAVLVSYDAPDPNSIVTIMLPQIERIPTYTTWLFLDRNELMTESVEGRRQIYYDRNCGETLICSDSEEDMPNEEEEKRDFIKSEDFILCMTIKELGLSDIVLESLGQCFSRDATGVKERYETLSNKDNAAGGSKTRDIEGNFQSGNLFLEKDLGEVLGSFDNLFCRRCHDFVCRLHGCNQDLVFPADKQTPWSPPDSTNAPCGPNCFRLVLNSEIFARATSSSQANVIESHSGDVGEQMLSKKFSGVFAKRQKKCSKSESASSNAKSIYESSGSGNGPIQDIASSSHSILPKIRSMKKGGIGKTNSKRVVDCVLVSMQKRQNKAMTSNSNSTGEGLDRSSNKIDKNSPIISSEDMGKEFVHEKDCQLKFTDDESWKPLEKGLLDKGMQIFGRNSCLIARNMLNGLKTCWEVYQYIDYKEGKMSVPNGDAPSSPLEVYFKGNKKVRRRSKFLRRRGRVGRLRYTWKSTAYRTNRKRITERKDQLYKQYNPCGCQSACVKQCPCRENGTYCEKYCGCPDSCKIRFRGCRCAKSQCQSRQCPCFAAQRECDPDVCRNCWVGCGDGTLGIPGQRGDNECRNMQFLLRQQRRILLAKSDVHGWGAFLKDKVEKNEFLGEYTGELISHREADKRGKIYDRENSTFLFNLNDQFVVDAHRKGNKLKFANHSPHPNCHAKVVMVAGDHRVGIFATDRIAAGEEIFYNYRFAPECTPDWVRKLEASGSKKENGASSSGRAGRAKKSA* 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1422 864 MobiDBLite consensus disorder prediction 842 864 - -
Lan6g1422 864 Gene3D SET domain 613 829 IPR046341 -
Lan6g1422 864 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 30 460 - -
Lan6g1422 864 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 483 858 - -
Lan6g1422 864 MobiDBLite consensus disorder prediction 846 864 - -
Lan6g1422 864 MobiDBLite consensus disorder prediction 447 474 - -
Lan6g1422 864 ProSiteProfiles CXC domain profile. 599 698 IPR026489 -
Lan6g1422 864 SMART set_7 712 833 IPR001214 GO:0005515
Lan6g1422 864 CDD SET_EZH 712 828 - -
Lan6g1422 864 SMART CXC_2 647 684 IPR033467 -
Lan6g1422 864 MobiDBLite consensus disorder prediction 392 416 - -
Lan6g1422 864 Pfam SET domain 723 826 IPR001214 GO:0005515
Lan6g1422 864 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 36 862 IPR025778 GO:0031519
Lan6g1422 864 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 30 460 IPR045318 GO:0006338|GO:0018024
Lan6g1422 864 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 483 858 IPR045318 GO:0006338|GO:0018024
Lan6g1422 864 SUPERFAMILY SET domain 595 828 IPR046341 -
Lan6g1422 864 ProSiteProfiles SET domain profile. 712 827 IPR001214 GO:0005515
Lan6g1422 864 Pfam CXC domain 651 682 IPR041355 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1422 Lan-Chr6 19044982 19062117 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1422 701 830 C2H2 Transcription Factor Family AT2G23740 28.571 3.98e-10 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lan6g1422 SET 2.6e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1422 - K11430 gmx:100809840 1081.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g1286 17 21098815 21107321 Lan6g1422 6 19044982 19062117 LSH
Lan18g1002 18 15052576 15060817 Lan6g1422 6 19044982 19062117 LSH