Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1417 ATGCCCAATAACCCAACAACAACAACAAACATGAACGACCAGTTATCAAAACAGACATCAATCTTCGGCCTCCGATTATGGGTTGTTGTCGGCGTTTGTGTCGGCGCCACCATCGTCCTCCTCCTTGTCCTTATCTCTCTCTGGCTCACTTCAAAGTTCTCCAAATCCAAAACTAAATCCAAAACCAAACACAACACTGGTCCCACCACAATCCCTGATATCTCTAAAGAGATCCAAGAAATCACAATAGACCCGGCAACCCGACCCGACCCATTTCATGAACCCGACCCAGTTACTGGAATCGAACGCCAAGCCTTACTTACACTTCAACAACCAGAACAAAACACCGACCACAACAACAGTAACGGTAACGGTAACAGTAACGGTAACGGTAATAACACGGCGTTGTTGGGGTTCAATAGAATTCAGTTTGAGATTGGGAAGAATCACAGAATTTCTTACCCTGAACGTGTTTTTGTGAGATCTTCTTCGCAATCTCAACATGGTAGTGGAGAAGGTAGACATTTGGATCAGGTTGCTACTGTGATTCCTGAAGTTTCGCATTTGGGTTGGGGTCATTGGTACACTCTCAGGGAGCTTGAGGATTCGACCGATGAATTCGCGGTCGAGAATGTTATTGGTGAAGGTGGATATGGAATCGTTTACCATGGTGTTTTGAAGGACAATACTCATGTTGCTATTAAAAATTTGCTCAATAATAAGGGACAAGCTGAGAGAGAGTTTAAGGTTGAAGTTGAAGCTATAGGAAGAGTTCGGCATAAGAATCTAGTGAGGTTGCTTGGCTATTGTGCTGAAGGGGCTCATAGAATGCTTGTGTATGAGTATGTTGACAATGGCAATTTAGAGCAGTGGCTACATGGAGATGTTGGGCCTTCCAGTCCTCTAACTTGGGAAATTCGAATGAACATTATTCTAGGAACGGCCAAAGGGCTAACTTATCTTCATGAGGGGCTGGAACCAAAGGTTGTACATCGCGATATAAAGTCGGGCAACATTTTGATTGATAGGCAGTGGAATTCGAAGGTTTCAGACTTTGGTCTTGCCAAACTTCTTGATTCTGATAGCAGCTATATCACAACCCGTGTAATGGGTACATTTGGATATGTTGCTCCTGAATATGCAAGTACTGGCATGTTGAATGAACGAAGTGATGTGTATAGTTTTGGAATTCTCATTATGGAAATAATTACTGGCAGGACTCCGGTTGATTATGGCCGTCCTCCAGAAGAGGTTAATTTGGTTGAGTGGCTCAAAAAGATGGTTAGTAACAGAAATGCAGAGGGAGTGTTGGATCCCAAACTCCCTGAGAAACCAACTTCAAGGGCACTAAAGCGTATCCTTCTTGTAGCATTACGCTGCACAGACCCTAATGCACAAAAGCGGCCCAAAATGGGGCATGTCATACACATGCTTGAAGCAGAAGATTCCCCTTACAAAGAGGATCGTAGAGCCAGGAGGGATTCAGAACATTCACCTAGCAATAAAGTAGGTGATGGATTGAAAGAAGAACCATCTGTTTCCAGCGATGATCGTAGTATTGAAACCAATATGCAGGTTAATGAGACAAGATGA 1593 0.4357 MPNNPTTTTNMNDQLSKQTSIFGLRLWVVVGVCVGATIVLLLVLISLWLTSKFSKSKTKSKTKHNTGPTTIPDISKEIQEITIDPATRPDPFHEPDPVTGIERQALLTLQQPEQNTDHNNSNGNGNSNGNGNNTALLGFNRIQFEIGKNHRISYPERVFVRSSSQSQHGSGEGRHLDQVATVIPEVSHLGWGHWYTLRELEDSTDEFAVENVIGEGGYGIVYHGVLKDNTHVAIKNLLNNKGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVDNGNLEQWLHGDVGPSSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSGNILIDRQWNSKVSDFGLAKLLDSDSSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEIITGRTPVDYGRPPEEVNLVEWLKKMVSNRNAEGVLDPKLPEKPTSRALKRILLVALRCTDPNAQKRPKMGHVIHMLEAEDSPYKEDRRARRDSEHSPSNKVGDGLKEEPSVSSDDRSIETNMQVNETR* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1417 530 SUPERFAMILY Protein kinase-like (PK-like) 184 479 IPR011009 -
Lan6g1417 530 ProSiteProfiles Protein kinase domain profile. 207 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1417 530 MobiDBLite consensus disorder prediction 113 134 - -
Lan6g1417 530 MobiDBLite consensus disorder prediction 472 516 - -
Lan6g1417 530 SMART serkin_6 207 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1417 530 Pfam Protein kinase domain 208 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1417 530 MobiDBLite consensus disorder prediction 465 530 - -
Lan6g1417 530 PANTHER OS01G0323000 PROTEIN 6 525 - -
Lan6g1417 530 PANTHER RECEPTOR-LIKE KINASE PLANT 6 525 - -
Lan6g1417 530 CDD STKc_IRAK 213 479 - -
Lan6g1417 530 ProSitePatterns Protein kinases ATP-binding region signature. 213 235 IPR017441 GO:0005524
Lan6g1417 530 ProSitePatterns Serine/Threonine protein kinases active-site signature. 329 341 IPR008271 GO:0004672|GO:0006468
Lan6g1417 530 Gene3D Transferase(Phosphotransferase) domain 1 283 496 - -
Lan6g1417 530 Gene3D Phosphorylase Kinase; domain 1 179 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1417 Lan-Chr6 18914228 18917769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1417 184 481 Trihelix Transcription Factor Family AT1G70460 46.865 1.78e-88 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lan6g1417 Pkinase 3.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1417 - - lang:109350106 1005.74