Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1415 ATGAAACGCCGAGGACTTCAAATTGGAAAATTTTATCGAGTCCGAAGTGAAGATAGTTCTGACCCATCAATTAGATCATCAAAAAGATTGAATCCTTCTCCAAATTCCAACACAAATCCAAGTCCTGAAATATTTCTAGATAACCAACCAAGGACAAAAATTAGTACTTCTTATCAAAAGAGTGGTGATATTGTGAACCATTCTAGCCCTAAGCCAAGTTCACCAAAAATGGGTGTTTCTAATGGAGGCTCTGTGTCAAAATCTAATATTCATGTTGATGGAAATTCTGACCCCAATTTCCTTAGTCCAGAAATGAGAAAAAAACACTTGGGCCGGCTTCACTCTTTGATGGTTCGACTAAGTGCTGGTGGTGCTAAGCAATTTGAGACGATGAATGGAACTTCGTCAATTCTATCCGAGTTGTTTGAGGAGGCAAATATTCTACTGAATGAGGATAACATTAATCAAGATGAGAGGTTCTTTGTTGAAGAAGAGCAAAATAAGGGCAAGAATGTGGATATGGAAATGGGACTGAATGAGGAAGAGATTATGACGTGTATTAAGCATGAAACTTTTGAGTCTGCCAGTGAGAAGTGTTTAGAAAATAAAGAAGCTTGCAGGATGTGCCAGTTGATTTACATGAATGGGGAAAAACTTGGAAGGTTGGATTGCTTACACAAATTTCATATGGAATGCATCAAAGATTGGCTGTCAGTGAAGAACAAATGCCCCGTGTGTAAAAGAAGAGCATTACTGCCTATTGATGATGACGGTGATGTTGATAATGCTACTGATCTCGATGATGGTTATGATTGTGATGATGAAGCTCTTACTACTGATACTGATAGTGATATTGAAGATGAGTAG 867 0.3806 MKRRGLQIGKFYRVRSEDSSDPSIRSSKRLNPSPNSNTNPSPEIFLDNQPRTKISTSYQKSGDIVNHSSPKPSSPKMGVSNGGSVSKSNIHVDGNSDPNFLSPEMRKKHLGRLHSLMVRLSAGGAKQFETMNGTSSILSELFEEANILLNEDNINQDERFFVEEEQNKGKNVDMEMGLNEEEIMTCIKHETFESASEKCLENKEACRMCQLIYMNGEKLGRLDCLHKFHMECIKDWLSVKNKCPVCKRRALLPIDDDGDVDNATDLDDGYDCDDEALTTDTDSDIEDE* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1415 288 MobiDBLite consensus disorder prediction 25 96 - -
Lan6g1415 288 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 22 251 IPR045191 GO:0061630
Lan6g1415 288 ProSiteProfiles Zinc finger RING-type profile. 206 247 IPR001841 -
Lan6g1415 288 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 154 251 IPR013083 -
Lan6g1415 288 SUPERFAMILY RING/U-box 195 253 - -
Lan6g1415 288 MobiDBLite consensus disorder prediction 265 288 - -
Lan6g1415 288 MobiDBLite consensus disorder prediction 1 103 - -
Lan6g1415 288 MobiDBLite consensus disorder prediction 10 24 - -
Lan6g1415 288 Pfam Ring finger domain 205 247 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1415 Lan-Chr6 18806262 18809625 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1415 149 251 C3H Transcription Factor Family AT2G15530 38.679 6.46e-18 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1415 - - lang:109350511 561.992