Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1414 ATGGATTGGATTCGAGGTGAATCAATTGGTAGAGGAAGCTTTACTACAGTGAATTTAGCAATTCCAAAAACCAATTCAACTCAGTTTTCTTCTCCAACTGCGGTGAAATCCTGTGAAGTTTCAACCTCTTCTTTGCTAAAGAACGAGAAACAAATCCTTGATTGCATAGGTTCTTGTCCCAAAATAATTCGTTGTTTAGGAGATAATTATAGCTTTGAGAATGGTTCCGAGTACTACAACTTGTTCCTCGAGTATGCCTCTGGTGGGAGCCTCTACGATCAGCTCAAACTTCACGGTGGAAGGTTCTCCGAGGCCGTGGTTCGTGGTTGCACGAGGTCTATAATCGAGGGTCTAATTCATATTCATCAAAATGGGTATGTTCATTGCGATATAAAGCTGCAAAACATTCTCGTATTCAAGGGAGGAGATATTAAGATTGCTGATTTTGGACTGTCGAAGGAAACAGGGGAAAAACAGAGCAAAACATTGTTTGAATGCAGGGGAACTCCTATGTTTATGTCACCGGAAACTGTTAATGACAATGAGTATGAATCACCCGCGGATATATGGGCTCTAGGTTGTGCCGTGGTGGAAATGGTTACAGGGAAACCAGCGTGGAACATTAAGAATTTGTCAAATATATGGTCATTGTTCGCTCGCATCGCGGTTGGAGAAGAATTGCCTGAGATTCCTCATGACTTATCGCAAGAAGGTAAGGATTTTCTTACAAAGTGTTTTATTAAGGATCCGAGAAAAAGATGGACGGCTGAGATGCTTTTGAAGCATCCATTTGTTGCTGATGGAAGTGCTGCATTGGAGTGTGTTAATGAGAAAAAGTCATCACCAAGAAGCCAATTTGATTTCCCTGATTGGGTTTCTAACACCACTGTTTCAGTTATGTGTTCATCTGAATTAAGAGAGGGTAGTGAATGGAATTATGGTTCATCTTGTTTGTCTAATTTTTATTCCCCGGCCGATCGCCTCCAAGAAATTGTGACAAATCATGGACCGGTGAATTGGTCTGATTCAGATGGTTGGACATGTGTTAGGTGA 1053 0.4131 MDWIRGESIGRGSFTTVNLAIPKTNSTQFSSPTAVKSCEVSTSSLLKNEKQILDCIGSCPKIIRCLGDNYSFENGSEYYNLFLEYASGGSLYDQLKLHGGRFSEAVVRGCTRSIIEGLIHIHQNGYVHCDIKLQNILVFKGGDIKIADFGLSKETGEKQSKTLFECRGTPMFMSPETVNDNEYESPADIWALGCAVVEMVTGKPAWNIKNLSNIWSLFARIAVGEELPEIPHDLSQEGKDFLTKCFIKDPRKRWTAEMLLKHPFVADGSAALECVNEKKSSPRSQFDFPDWVSNTTVSVMCSSELREGSEWNYGSSCLSNFYSPADRLQEIVTNHGPVNWSDSDGWTCVR* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1414 350 Pfam Protein kinase domain 6 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1414 350 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 1 304 - -
Lan6g1414 350 Gene3D Transferase(Phosphotransferase) domain 1 2 311 - -
Lan6g1414 350 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 304 - -
Lan6g1414 350 ProSiteProfiles Protein kinase domain profile. 3 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1414 350 SUPERFAMILY Protein kinase-like (PK-like) 3 303 IPR011009 -
Lan6g1414 350 CDD STKc_MAPKKK 2 265 - -
Lan6g1414 350 SMART serkin_6 3 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1414 350 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1414 Lan-Chr6 18776861 18778173 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1414 1 350 MAP Kinase Kinase Kinase AT4G36950 49.575 1.75e-112 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lan6g1414 Pkinase 2.8e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1414 - - aprc:113858661 479.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1414 6 18776861 18778173 Lan6g1414 6 18776861 18778173 PCT