Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1412 ATGGACGTGGACATAGTGAAAACTTCAGAGTGTGACACTAGCAGCATGGACATGATGACAATGATGATGCAAATGGAAAAGTTTCCTGAATTCTATGAACCTTTTTATAACAACACTCCCACTAGTTTCCAAGAAAATGAGTTATTCATCAATGGTGGAACTAGCTCCACTATATTCAACGTAGCACCACAACCTTCTTTGCTTGATCCATCACCTTCCAATATTCAAAGCATCAACAACAACAACAATATTTTTCAACAACCCATGACACTACCTCCTCAACAGCAACAACCCAATGAGGTTAACCCATCAGGGAGGTTATTCAGGAATGTTTCTGATGCTTATCATTCATCTTCAGAGAAAAGAAACTCCATGGCTGCAATGAGGGAAATGATTTTCAGAATAGCAGTTATGCAACCAATTCATATAGACCCAGAATCTGTGAAACCACCAAAGAGAAGGAACGTGAAGATTTCCAAGGATCCACAAAGCGTGGCTGCGAGGCACAGGAGGGAAAGGATAAGCGAGAGGATAAGGATTCTTCAAAGGTTAGTACCTGGTGGCACCAAAATGGACACTGCTTCTATGTTAGATGAAGCTATACACTATGTGAAGTTCTTGAAGAAACAGGTCCAAACGTTGGAACAAGTAGGAAGAGGAAGTAGAACCCTTGGTATGGTTTCGTTTCCTACAGGGATGTCTAATGCAAATGTGAACTATTCTCCTTTGTTGATGAAGCAGGGTTGCCAACCTTGTCCAATGGTGGGTTCAACTTCAAAACAATTGTTAAGCTAA 795 0.4088 MDVDIVKTSECDTSSMDMMTMMMQMEKFPEFYEPFYNNTPTSFQENELFINGGTSSTIFNVAPQPSLLDPSPSNIQSINNNNNIFQQPMTLPPQQQQPNEVNPSGRLFRNVSDAYHSSSEKRNSMAAMREMIFRIAVMQPIHIDPESVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQVGRGSRTLGMVSFPTGMSNANVNYSPLLMKQGCQPCPMVGSTSKQLLS* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1412 264 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 1 252 IPR045843 GO:0003700|GO:0006355
Lan6g1412 264 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 162 218 IPR036638 GO:0046983
Lan6g1412 264 Pfam Helix-loop-helix DNA-binding domain 168 207 IPR011598 GO:0046983
Lan6g1412 264 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 158 207 IPR011598 GO:0046983
Lan6g1412 264 Gene3D - 157 223 IPR036638 GO:0046983
Lan6g1412 264 SMART finulus 164 213 IPR011598 GO:0046983
Lan6g1412 264 PANTHER BASIC HELIX-LOOP-HELIX (BHLH)-LIKE PROTEIN 1 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1412 Lan-Chr6 18670128 18671293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1412 12 216 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 55.450 2.06e-49 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan6g1412 HLH 1.7e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1412 - - gmx:100800816 254.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0310 17 2248183 2249446 Lan6g1412 6 18670128 18671293 LSH