Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1393 ATGTTTCATCACCAAACAAAGTTTGCTATTGTCTTCACAATCTTCATGTTCTACTCAACAAAAGCCATAAACAACAACTGCGAGAGGAGTTGTGGAAAACATTCCCTGAAGTACCCTTTTGGATTCTCTTCTGGGTGTGAAATCCAACTTAACTGTGCAGAAAGAAAACAAGTACAAATTGGAGAGTTAAAAGTCCAAAACGTAACTTCTGACAGCATATACATTCGTTTACCTGCTAAATGCAACCGTAGGATAAGCTTCGTAGACCCACTTTTTGGTAAAAACTTCGCTCCAACACGGAATAACAGCTTTCTAGTACAACGTTGTTCATCTCATCTTGGAGGCTGTGTTATTCCCACATCAATTTTCTTTGGTAGCTTGAAGTTGGAAGGGTGTGAACATAAAAGAAGTGAAGATATCAATTGTTTGACGATGCTGAAGGGTAAAGATGTTATGATGATGACACATGAGGAATTGAAGGGAAGTGGGTGCAAGTTTTTGTTCTCTGCTATTGCTGTTGATAAGAGTAAAGAGCTTTCGCTGCAATTTCAAGTGGTTGAGTTGGGGTGGTGGCTTGAAGGACCTTGCCATTGCTCTAATAATGAGACTTGTACTGAGGTCCATCTTGCGGGAGGAAAACAAGGGTTCCGTTGCCACTGCCGTGAAGGTTTCACCGGAGATGGGTTCATAGACGGCACCGGTTGCCGGAGAGTTTCTCATTGCAATGCTTCAACACTTAATTTTGGGGAATGTGGGAGAGCAATCAAAATTGGAGTCCTTGTTGGAGTGATCATTGTTGGAGCTTCCCTGGTGGCTGCTCTGTTTCTTCTATGTTACTTTACCAAGCATCGTTCTACTTGGCTGAGAAAACAAGTGACGATAAAGCGCCTATTACGAGAAGCTGCAGGAAACTCTAGTGTTCCTTTCTACCCCTACAAAGAAATAGAAAGAGCTACAGATTCTTTCTCTGAGAAACATAGACTGGGAACTGGTGCTTTCGGCACAGTTTATGCTGGAAATCTTCACAATGATGAGTGGGTTGCTGTAAAAAAAATCAAGCATAGGGACACCAATAGTGTTGATCAAGTCATGAATGAGATCAGGCTCCTTTCTTCGGTCAGTCACCCGAATTTAGTTCGCCTCCTAGGTTGCTGTATAGAGGACGGAGAGCAGATACTCGTTTACGAGTATATGCCGAATGGAACACTCTCTCAACATTTGCAAAGAGAGAGGGGTGAAGTCCTACCATGGACAATAAGACTCACCGTTGCTACTGAAACTGCTAATGCTATAGCATATCTTCATTCTGCAATTGATCCTCCAATTTACCACAGAGATATTAAATCTAGTAATATTCTCTTGGACTATAGCTTTCAATCGAAAGTAGCAGATTTCGGACTTTCTAGGCTTGGCATGACAGAAAATTCACATATCTCAACCGCGCCACAAGGGACTCCAGGTTATGTTGACCCCCAATACCACCAGAACTTCTACCTTTCTGATAAAAGTGATGTCTACAGCTTTGGAGTGGTTTTGTTAGAGATAATAACGGCCATGAAAGTGATTGATTTTGCTAGACCTCAGAGTGAGGTTAACTTGGCTACATTTGCTGTTGATAAGATTAGGAGGGGCTGTGTAGATGAGATCATAGATCCTTTCCTTGAACCGCATAGGGATGCTTGGACACTCTATTCTGTTCTCAAGGTAGCTGAGCTTGCATTTAGATGCCTTGCTTTTCATAGTGACATGAGGCCTACTATGATGGAAGTGGCAGAAGAGCTCGAACAAAACAGATGGAGCGGATGGGCAACCATGGAGGAAACTATATGCATGGCTTCGTCAGTCGAGTCTGCGTGTTTATCGCCTCGCAATGGAAGTGAGAAATCACTGAGTAGTATTAAATTCAAGAGAGAAGGTCAGGTAAGTGAGACATTGACTGTTCCAAAGAGAACAGATATTTGTTTGCATTCAATGGAGGAGGTGAAGGAGAGCTCCCCTGTATCTGTTCAAGATAATAATTGGTTAAGTGAACCTAGCTCACCTTCAACAAACACATGCTAG 2061 0.4241 MFHHQTKFAIVFTIFMFYSTKAINNNCERSCGKHSLKYPFGFSSGCEIQLNCAERKQVQIGELKVQNVTSDSIYIRLPAKCNRRISFVDPLFGKNFAPTRNNSFLVQRCSSHLGGCVIPTSIFFGSLKLEGCEHKRSEDINCLTMLKGKDVMMMTHEELKGSGCKFLFSAIAVDKSKELSLQFQVVELGWWLEGPCHCSNNETCTEVHLAGGKQGFRCHCREGFTGDGFIDGTGCRRVSHCNASTLNFGECGRAIKIGVLVGVIIVGASLVAALFLLCYFTKHRSTWLRKQVTIKRLLREAAGNSSVPFYPYKEIERATDSFSEKHRLGTGAFGTVYAGNLHNDEWVAVKKIKHRDTNSVDQVMNEIRLLSSVSHPNLVRLLGCCIEDGEQILVYEYMPNGTLSQHLQRERGEVLPWTIRLTVATETANAIAYLHSAIDPPIYHRDIKSSNILLDYSFQSKVADFGLSRLGMTENSHISTAPQGTPGYVDPQYHQNFYLSDKSDVYSFGVVLLEIITAMKVIDFARPQSEVNLATFAVDKIRRGCVDEIIDPFLEPHRDAWTLYSVLKVAELAFRCLAFHSDMRPTMMEVAEELEQNRWSGWATMEETICMASSVESACLSPRNGSEKSLSSIKFKREGQVSETLTVPKRTDICLHSMEEVKESSPVSVQDNNWLSEPSSPSTNTC* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1393 686 Gene3D Transferase(Phosphotransferase) domain 1 398 610 - -
Lan6g1393 686 Pfam Protein kinase domain 323 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1393 686 ProSiteProfiles Protein kinase domain profile. 322 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1393 686 MobiDBLite consensus disorder prediction 663 686 - -
Lan6g1393 686 MobiDBLite consensus disorder prediction 662 686 - -
Lan6g1393 686 ProSitePatterns Protein kinases ATP-binding region signature. 328 351 IPR017441 GO:0005524
Lan6g1393 686 Gene3D Phosphorylase Kinase; domain 1 291 397 - -
Lan6g1393 686 SMART serkin_6 322 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1393 686 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 13 669 - -
Lan6g1393 686 SUPERFAMILY Protein kinase-like (PK-like) 304 595 IPR011009 -
Lan6g1393 686 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 13 669 IPR045274 GO:0007166
Lan6g1393 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1393 Lan-Chr6 16968705 16974376 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1393 1 685 Receptor kinase-like Gene Family AT2G23450 54.922 0.0 729
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lan6g1393 PK_Tyr_Ser-Thr 1.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1393 - - gmx:100810861 1016.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0285 17 1992429 1997276 Lan6g1393 6 16968705 16974376 LSH
Lan18g1023 18 15264252 15268741 Lan6g1393 6 16968705 16974376 LSH
Lan17g0285 17 1992429 1997276 Lan6g1393 6 16968705 16974376 PCT
Lan18g1023 18 15264252 15268741 Lan6g1393 6 16968705 16974376 PCT
Lan6g1393 6 16968705 16974376 Lan6g1393 6 16968705 16974376 PCT
Lan6g1393 6 16968705 16974376 Lan17g0285 17 1992429 1997276 PCT
Lan6g1393 6 16968705 16974376 Lan18g1023 18 15264252 15268741 PCT