Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1377 ATGCCTGTGATAATTTCAGTTCAGCCAATAAAATCGGCGAGGGTGGTTTTGGTTCTGTCTATAAGCGGTTATTTGGCACCGGAGTATGCAATAAGGGGGCAATTGACACGAAAAGCGGATATTTACAGCTTCGGTGTTCTCCTTGTGGAGATAGTCAGTGGAAGATGTAACACAAATGCAAGATTACCTATAGGAGATCAATTCATTCTGGAAAAGACATGGGAGCTTTATGAGAAAGGGGAATTGGTAGGGCTGGTAGACATATCACTAAACGACTTCTTTGATGCCGAAGAAGCTTGTAGAATTCTGAAGATTGCCCTTCTTTGCACTCAAGATAATCCAAAACTCAGGCCATCCATGTCTTCTGTGGTTAAGATGCTCATTGGAGAAATTGATGTTGGTGAAAGTAAGATAACAAAACCAAGCTTGATATCAGATATTATGGACCTCAAAGTCAAAGAACAAAAAGGTAATGATGATATGAAGATTTCATCTTCATATAGTGCATCCTCTGCCTCAGACAGCCAGGGTAATACCATGTCATTTGCTGCAAATACAACCTTCACTGTACAATATGATTAA 582 0.3986 MPVIISVQPIKSARVVLVLSISGYLAPEYAIRGQLTRKADIYSFGVLLVEIVSGRCNTNARLPIGDQFILEKTWELYEKGELVGLVDISLNDFFDAEEACRILKIALLCTQDNPKLRPSMSSVVKMLIGEIDVGESKITKPSLISDIMDLKVKEQKGNDDMKISSSYSASSASDSQGNTMSFAANTTFTVQYD* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1377 193 Pfam Protein tyrosine and serine/threonine kinase 24 127 IPR001245 GO:0004672|GO:0006468
Lan6g1377 193 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 42 23 169 - -
Lan6g1377 193 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 23 169 - -
Lan6g1377 193 Gene3D Transferase(Phosphotransferase) domain 1 11 145 - -
Lan6g1377 193 ProSiteProfiles Protein kinase domain profile. 1 143 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1377 193 SUPERFAMILY Protein kinase-like (PK-like) 23 134 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1377 Lan-Chr6 16068229 16071789 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1377 23 146 Receptor kinase-like Gene Family AT1G56120 48.387 1.60e-32 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan6g1377 PK_Tyr_Ser-Thr 5.1e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1377 - - lang:109350064 365.155