Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1368 ATGGCAATGCTTGCAGATGCTGTAGTTGGAGCTCTGGTTGGGGAACTCTTGAGTGCAGTTTTGGAAATGAAAGACAAGGCTGTTAACTTCAGACCTACCCTGGAACGGTTGGAGTTCACACTCAAATCCTTAGAACCCGTGATCAACAAGATCGAGAATTTGAACAGGCAATTAGATAGGCCGAAAGAGGAAACTGAGAGTTTGATCAATCAGATGAAGAAAGGGAAGGAACTTGTTCTTGAATGTTCGAAAGTCCGGTGGTGGAAATGCTGTTACATGGCTAACTACCAAGACGAACTTCAAGCATTGGATGAGTCGATTCTTCTGTTCTTTCAATTAGATATGCAAGGTCATATACGGAGAGATGGGGCAGAGACCTTGGTGGAGGTGAAAATGATTAAAACTGAAATTAAGAAACTGAATTTCGGTACTAGAAATGATAGGATGGAATTAAAGGGCCTGTGTTCCCCTCCTGAACCACCTGAATTTATTGTTGGGTTGGATGTTCCTATGAGGGAGTTGAAGCTGAGGTTGTTGCAGGATCAGGTTGGTGTCTCAGTAGTCAATGTGACCGGTTCAGGAGGTTCCGGCAAGACCACATTAGCTAAAATGATTTGTTGGGATGACCAAGTCAGAGGTATATTCAATAAGAACATCTTCTTCATCACCTTTGCAAAAACACCCAAGTTGAACTCCATTGTGCAGAAACTGTTTCAACACACTGATTACCAGGTTCCCGAGCTTGAAAGTGACGAAGACGCGGTTAACCAATTGGAAAATTTGCTAAAACAGATTGGGAAAAGCCCAATTCTGTTAGTCCTGGATGATGTTTGGCCCGGATCAGAATCTCTTATTGACAATTTTGCGTTCCAGATCACAGGCTACAAGATTTTAGTTACATCAAGATTCACTATCGGAAGATTCGGCCCTCCATACGTCTTGAAGCCCCTTGGTGAAGAAGATGCTATAAAGCTTTTTCACCACTCAGCATCCCTGACTCATATTAGCTCTGATGTTCCTGATGATGTTGTAAAAGAGATAGTGAGAGGCTGCAGTGGTTCTCCCTTGGCACTTAGAGTGAGTGGAAGATCACTAAGTCATCAGAATCCAGTGATCTGGCACAACAGGGCGAGGGAATTGTCTAAGGGACATTCAATTCTCGACTCTAGTAATGACGTACTTGTTTCTCTCCAGAAAAACTTCGATGTTTTAGACCCTAAGGTCATTGAGTGTTTCAGGGACCTATCCTTATTCCCGGAAGACCAGAGGATCCCTGCCTCAGCCCTTGTTGATATGTGGGCAGAACTGCTTGGATATGATGATGAGAGTGCAATGGAGAAAATTTACCAACTGGTCAACCTGAACATGGCTGATATTGTTGTTACAAGGAAAGTTGCAAGTGGCACAATTGACTGCAATTATCACTACGTCACACAGCATGATCTTCTTCGGGATCTAGCTATACGTCAAACTAGTCAGAAGCCGGTAGCGCTGAGGGATAGAGTAATTATTGATTCAAATGATAATAGTCTTCCTAAATGGTGGACTCAAGAGAATGAGTGTACTATTAAAGCCAGCATATTATCCATATCAACAGATGAAAAGTTCACTTCTAACTTGCAGCCAACTGAAGTTGAGGTTCTAGTGTTAAACCTTCGTGCGAAGAAGTTCGCGCTACCGTTGTTCGTGAAGAAAATGAGTAAATTAAATGTTTTGATAATCACAAACTATGATTTCTATCATGCTGAGTTAGAGAATTTTGAGTTGCTTCATTATCTATCCAATCTTAAAAGAATCAGATTAGAGAAGGTTTCAATTCCTTTCTTCAGCAACACTGGATCGCAATTGAAGAATCTTCAAAAATTATCTCTTTTTATGTGCAATGTGAATGAAGCATTTAAAGATAGCACTGTCCAAGTTTCAGATATGCTTCCAAATTTGGTTGAAATGAACTTCGACTACTGCAATATGGTGGAATTGCCTGTTGGGATCTCTAACATGGTCTTCTTAATGAAGCTCAGTATCACAAACTGCCATAAACTTTCTACACTTCCGAATGGAATCGGAAATCTGGTCAATTTGGAATCACTATGGCTTAGTTCGTGTACTAGTTTAGAAGCGTTGCCAGACTCAGTCGCCAAACTTGATAGCCTTAAACTTCTTGATATCTCTGGCTGCATAAGCCTTTATGCATTGCCTGAGAAAATGGGGGAATTACGTAATTTAGAGAAGCTCAATGTTAGAGGCTCAAAATTAAGCAACTTGGGACCTTTAATCATGGACCTAGAAGGCTTAAGGCATGTGGTATGTGATGAAGAGACAGAGGAGTTATTGGAACCTTTCACTAACATCCTTAGTAGTCTAAAGCTAGAGGTAGTCCAGTCTGATGACAATTTAAATTGGCTTTTCTGA 2412 0.4104 MAMLADAVVGALVGELLSAVLEMKDKAVNFRPTLERLEFTLKSLEPVINKIENLNRQLDRPKEETESLINQMKKGKELVLECSKVRWWKCCYMANYQDELQALDESILLFFQLDMQGHIRRDGAETLVEVKMIKTEIKKLNFGTRNDRMELKGLCSPPEPPEFIVGLDVPMRELKLRLLQDQVGVSVVNVTGSGGSGKTTLAKMICWDDQVRGIFNKNIFFITFAKTPKLNSIVQKLFQHTDYQVPELESDEDAVNQLENLLKQIGKSPILLVLDDVWPGSESLIDNFAFQITGYKILVTSRFTIGRFGPPYVLKPLGEEDAIKLFHHSASLTHISSDVPDDVVKEIVRGCSGSPLALRVSGRSLSHQNPVIWHNRARELSKGHSILDSSNDVLVSLQKNFDVLDPKVIECFRDLSLFPEDQRIPASALVDMWAELLGYDDESAMEKIYQLVNLNMADIVVTRKVASGTIDCNYHYVTQHDLLRDLAIRQTSQKPVALRDRVIIDSNDNSLPKWWTQENECTIKASILSISTDEKFTSNLQPTEVEVLVLNLRAKKFALPLFVKKMSKLNVLIITNYDFYHAELENFELLHYLSNLKRIRLEKVSIPFFSNTGSQLKNLQKLSLFMCNVNEAFKDSTVQVSDMLPNLVEMNFDYCNMVELPVGISNMVFLMKLSITNCHKLSTLPNGIGNLVNLESLWLSSCTSLEALPDSVAKLDSLKLLDISGCISLYALPEKMGELRNLEKLNVRGSKLSNLGPLIMDLEGLRHVVCDEETEELLEPFTNILSSLKLEVVQSDDNLNWLF* 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1368 803 PRINTS Disease resistance protein signature 187 202 - -
Lan6g1368 803 PRINTS Disease resistance protein signature 264 278 - -
Lan6g1368 803 PRINTS Disease resistance protein signature 351 365 - -
Lan6g1368 803 PRINTS Disease resistance protein signature 713 729 - -
Lan6g1368 803 SUPERFAMILY RNI-like 548 770 - -
Lan6g1368 803 PANTHER LRR AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 1 802 - -
Lan6g1368 803 Coils Coil 248 268 - -
Lan6g1368 803 Coils Coil 51 71 - -
Lan6g1368 803 Pfam NB-ARC domain 171 370 IPR002182 GO:0043531
Lan6g1368 803 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 415 IPR027417 -
Lan6g1368 803 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 4 138 IPR008808 -
Lan6g1368 803 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Lan6g1368 803 Gene3D - 317 400 IPR042197 -
Lan6g1368 803 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 1 802 IPR039203 GO:0050832
Lan6g1368 803 Gene3D - 153 306 IPR027417 -
Lan6g1368 803 Gene3D Ribonuclease Inhibitor 505 784 IPR032675 -
Lan6g1368 803 Gene3D - 401 490 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1368 Lan-Chr6 15802716 15807650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1368 165 785 WRKY Transcription Factor Family AT5G45050 22.257 6.98e-16 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1368 - - gmx:100812310 964.911