Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1335 ATGTCATCCTCTTCATCTACATTATCACTGGACCACCTCTCTCATTCCGAACAGCTTTGTTATGTTCATTGCAACATTTGTGACACTGTCCTTGCTGTAAGTGTTCCATGTACAAGCTTGTTCAAGACCGTGACTGTCCGATGCGGCCATTGCACCAACCTCCTTCCTGTGAACATGCGTGGATTGCTTCTTCCTTCACCCAACCAATTTCATTTGGGCTACTCTTTCATCTCCCCCTCTCATAACCTTCTGCAGGAGGAGATCCCAAACCCTTCCCCAAATTTGTTCATCAACCAGAATGCAAACATGGCGCATGACTTTTCTATGCCTCCTAGGACTGCAATTGATGAGCTTCCAAGGCCACCAATTACTAATAGACCTCCTGAGAAGAGACAGAGAGTCCCCTCCGCTTACAACCGTTTCATCAAGGATGAGATACAACGCATTAAAGCTGTTAATCCTGATATAACCCACAGAGAAGCATTCAGCGCAGCAGCCAAGAATTGGGCCCACTTCCCGCACATTCACTTTGGTCTCATGCCTACTGAACAAACTGTGATGAAGAAGACAAATGTGTGCCAGCAGGAAGGAGAAGAGGTTCTGATCAAAGATGGCTTTTATGGTTCGGCTAATGTTGGTGTTTCACCCTATTAA 654 0.4587 MSSSSSTLSLDHLSHSEQLCYVHCNICDTVLAVSVPCTSLFKTVTVRCGHCTNLLPVNMRGLLLPSPNQFHLGYSFISPSHNLLQEEIPNPSPNLFINQNANMAHDFSMPPRTAIDELPRPPITNRPPEKRQRVPSAYNRFIKDEIQRIKAVNPDITHREAFSAAAKNWAHFPHIHFGLMPTEQTVMKKTNVCQQEGEEVLIKDGFYGSANVGVSPY* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1335 217 PANTHER PROTEIN YABBY 6-RELATED 1 215 IPR006780 GO:0007275
Lan6g1335 217 PANTHER PROTEIN YABBY 4 1 215 - -
Lan6g1335 217 SUPERFAMILY HMG-box 124 172 IPR036910 -
Lan6g1335 217 Pfam YABBY protein 15 179 IPR006780 GO:0007275
Lan6g1335 217 Gene3D High mobility group box domain 123 175 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1335 Lan-Chr6 14826577 14831202 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1335 26 215 C2C2-YABBY Transcription Factor Family AT4G00180 59.155 1.33e-61 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Lan6g1335 YABBY 2.2e-70 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1335 K25796 - gmx:100798441 382.489