Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1325 ATGAATTCCCTTCATTTCCTTCTTTCTTTGTTTCTATTGCTTGTTGCATTTCCCAACCCTGATATGGTTTATGGAAATGCAGAGCTGAGAGCTCTAATGGACTTAAAATCCTCTCTTGACCCAGAAGGGAAGCTGCTAGGTTCATGGACTAATGATGGTGACCCATGCAGTGGTTCATTTGAAGGAGTTGTGTGCAATGAGCATCACAAAGTAGCTAATATTTCTTTGCCAGGAAGGGGTCTTATTGGTCAAGTTTCTTCAGCTGTGGCTGAACTTAGATGCTTGTCAGGTTTGTACTTGCATTACAACTTTCTTTCAGGGGAGATACCAAGAGAGATTTCCAATCTCAATGAATTGGTTGATCTTTATCTCAACATGAATAATCTATCTGGAACCATTCCTTCAGAGATAGGGAACATGGCTAGTCTCCAAGTGCTGCAGTTAGGTTATAACCAATTAGTAGGGAACATACCAAAGGAGATGGGTTCTTTGAAGCAGCTTAATGCTCTTGCTTTACAAAATAACAAGTTAACTGGTCAAATTCCTTTAAGCTTGGGGAACTTGGAGAAGCTAAGGAGGCTAAATTTGAGCTTTAACAACTTCAATGGCATTATTCCTGCTACACTTGCTGATATTCCACACTTGGCAGTTCTAGATATTCAAAACAATTCTCTATCTGGGACCGTTCCTTCGGCTTTGAGGAGATTAGGAGAAGGATTCCAAGGTGAAAACAATCCAGGTCTATGTGGAGTTGGATTTTCTACTTTGAGAGCTTGCAACAAAGATAAAGATTTATATGATAACAGCCAGATTGATGCCTCAAATGTATCCGTAAACAATAATCCTCCGAAGCATTTCCCGGAGCCTGCAAATATTGAGCTACATTGTAACCATACACATTGCTCAAAATCAAGGTTTCCTCAGGCTGTCATTGCAGCAAGTGTAGTAACAATCAGTATAACATTTATAGGTATTGGATTTTTTACATTTTTTAGATGTCGGCGGCGAAAGCAAAGGGTTAGAAATACATCAGATTCTTCTGAAAGCCAACTTAGTCCTGAGCAGCCGAAAGATTTCAACAGAAGAAGTCCATCTCCTCTTGTTAATATTGAGTATAGTTATAAAGCATGGGATGCATTGGCTGATGGTCAAAATGCAAGTGGATCATCCCATGAACATTTAAACAATTTTCGGTTCAATGTCGACGAGGTTCAATCCGCAACACAATACCTTTCCGAGGCCAATTTATTGAGTAAGAGCAAATTCTCTGCAGTATATAAAGGAGTCCTTAGAGATGGTTCTCTTGTGGCTATTAGAAGCATTAATGTAACATGCTGCAAAACTGAGGAAGCTGAATTTGTCAAGGGGTTGAGCCTATTAACCTCACTGAGACATGAAAACATTGTTAAGATGAGAGGTTTCTGTTGCTCAAGGAGTAGAGGTGAATGTTTTCTTATCTATGACTATGCCACCAAGGGTAATTTGTCTCAATATCTTGATTTGGAAGATGGAAATGATCATGTGCTTGAGTGGTCCAATAGGGTCTCTATCATCAAGGGCATTGCGAAAGGTATTGGATATCTTCACAGCAATGAAGAAACCAAACCTACAATAGTACACCAAAACATTTCAGTTGAAAATATTGTTCTAGACAATAAATTTAACCCATTGATCATGGATGCTGGGCTCCCTAAGCTTCTTGCAGACGATGTCGTATTCTCGGCTCTGAAAGTAAGTGCTGCAATGGGATACCTAGCTCCTGAATATATCACCACAGGAAGGTTTACTGAGAAGAGTGATATATATGCATTTGGTGTTATTGTTCTTCAACTTCTATCTGGGAACACAACAATAGGAGGGTCAATAAAGATAGCACTTGAGTCTTTCAAATTTGATGATTTTGTTGACACAAATCTGAAGGGAATGTATTCTAAATCTGAAGCAACAATTCTTTCAAAGCTTGCAATGTTGTGCACTCATGAAGTTCCTGATGAAAGGCCAACCATGATGGAAGTGATTCAGGAAATGACTATGGTTCCTGCTCATTCGGCATGA 2055 0.3932 MNSLHFLLSLFLLLVAFPNPDMVYGNAELRALMDLKSSLDPEGKLLGSWTNDGDPCSGSFEGVVCNEHHKVANISLPGRGLIGQVSSAVAELRCLSGLYLHYNFLSGEIPREISNLNELVDLYLNMNNLSGTIPSEIGNMASLQVLQLGYNQLVGNIPKEMGSLKQLNALALQNNKLTGQIPLSLGNLEKLRRLNLSFNNFNGIIPATLADIPHLAVLDIQNNSLSGTVPSALRRLGEGFQGENNPGLCGVGFSTLRACNKDKDLYDNSQIDASNVSVNNNPPKHFPEPANIELHCNHTHCSKSRFPQAVIAASVVTISITFIGIGFFTFFRCRRRKQRVRNTSDSSESQLSPEQPKDFNRRSPSPLVNIEYSYKAWDALADGQNASGSSHEHLNNFRFNVDEVQSATQYLSEANLLSKSKFSAVYKGVLRDGSLVAIRSINVTCCKTEEAEFVKGLSLLTSLRHENIVKMRGFCCSRSRGECFLIYDYATKGNLSQYLDLEDGNDHVLEWSNRVSIIKGIAKGIGYLHSNEETKPTIVHQNISVENIVLDNKFNPLIMDAGLPKLLADDVVFSALKVSAAMGYLAPEYITTGRFTEKSDIYAFGVIVLQLLSGNTTIGGSIKIALESFKFDDFVDTNLKGMYSKSEATILSKLAMLCTHEVPDERPTMMEVIQEMTMVPAHSA* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1325 684 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 6 679 - -
Lan6g1325 684 SUPERFAMILY L domain-like 28 235 - -
Lan6g1325 684 Gene3D Ribonuclease Inhibitor 141 252 IPR032675 -
Lan6g1325 684 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 679 - -
Lan6g1325 684 Pfam Leucine rich repeat 166 225 IPR001611 GO:0005515
Lan6g1325 684 SUPERFAMILY Protein kinase-like (PK-like) 387 678 IPR011009 -
Lan6g1325 684 Gene3D Transferase(Phosphotransferase) domain 1 491 681 - -
Lan6g1325 684 Pfam Protein tyrosine and serine/threonine kinase 415 675 IPR001245 GO:0004672|GO:0006468
Lan6g1325 684 MobiDBLite consensus disorder prediction 344 359 - -
Lan6g1325 684 ProSiteProfiles Protein kinase domain profile. 411 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1325 684 Gene3D Ribonuclease Inhibitor 27 139 IPR032675 -
Lan6g1325 684 Gene3D Phosphorylase Kinase; domain 1 376 489 - -
Lan6g1325 684 MobiDBLite consensus disorder prediction 341 365 - -
Lan6g1325 684 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1325 Lan-Chr6 14598978 14603095 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1325 10 524 Miscellaneous Gene Families AT4G22730 57.974 0.0 608
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Lan6g1325 PK_Tyr_Ser-Thr 6.5e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1325 - - gmx:100784155 975.311