Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1313 ATGGAGGCCAGTGACGGAGTTAGCGGCGGCGTTACGGTGGTGGGATCAGATGCTCCGTCGGAATACCATGTAGCTCCGAGGACGGAAAACTCAGCTCCGGCCGGTGGATCCACGACACCGAATCCGGCCACTATAGAGAGTGTTCCACCGTCGCTTACGGCGGTTGTGACGGCGGCGCCGTCTGGGACACCGGTACCGGGGAAGAAGAAGAGGGGCAGGCCTAGAAAGTATGCACCGGACGGTTCGGTGACTATGGCGCTGTCCCCGAAGCCGATATCTTCTGCTGCTCCGATGCCACCTGTGATTGATTTCTCGGCGGAGAGGCGCGAAAAAGTGAGGCCAAGCTCAGTGAGCAAAGCCAAGTTTGAGATAGAGAATTTAGGTGAATGGGTTGCAAGCTCAGTTGGTGCCAAATTTACACCCCATATCATCACTGTTAATGCCGGAGAGGATGTTACCATGAAAGTAATATCATTGTCTCAGCAAGGGCCTCGAGCTATATGCATTCTTTCGGCAAATGGTGTCATATCAAGTGTCACACTTGGTCAGCCTGATTCTTCTGGGGGTACATTGACATATGAGGGACGGTTTGAAATTCTGTCTCTATCTGGCTCATTTGTGCCGAATGATAGTGGAGGAACACGAAGCAGAGCAGGCGGCATGAGTATTTCTTTAGCTAGTCCAGATGGACGTGTCGTAGGTGGGGGAGTAGCTGGTCTGTTGGTGGCTGCTAGTCCTGTGCAGGTAGTGGTAGGCAGTTTTCTGGCAGGAAATCAACACGAGCAGAGGCCAAGAAAGCATAAACATGATGTTATATCAACTGCGACACCGACTGCAATTGTTCCTTTCTCCACTCCTGATGCAATACCTTTTCTATCATCACCACCATCCTTCCGTGGAGATAATTGGTCTGCCATGCCAGCGGATGCCGCAAACAAGCAAACGGGCATTAATGCAGCACTTCCTGGAGGGTAA 975 0.519 MEASDGVSGGVTVVGSDAPSEYHVAPRTENSAPAGGSTTPNPATIESVPPSLTAVVTAAPSGTPVPGKKKRGRPRKYAPDGSVTMALSPKPISSAAPMPPVIDFSAERREKVRPSSVSKAKFEIENLGEWVASSVGAKFTPHIITVNAGEDVTMKVISLSQQGPRAICILSANGVISSVTLGQPDSSGGTLTYEGRFEILSLSGSFVPNDSGGTRSRAGGMSISLASPDGRVVGGGVAGLLVAASPVQVVVGSFLAGNQHEQRPRKHKHDVISTATPTAIVPFSTPDAIPFLSSPPSFRGDNWSAMPADAANKQTGINAALPGG* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1313 324 MobiDBLite consensus disorder prediction 1 99 - -
Lan6g1313 324 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 9 313 IPR039605 GO:0003680
Lan6g1313 324 CDD DUF296 140 231 IPR005175 -
Lan6g1313 324 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 9 313 - -
Lan6g1313 324 ProSiteProfiles PPC domain profile profile. 136 275 IPR005175 -
Lan6g1313 324 Gene3D - 141 271 - -
Lan6g1313 324 SUPERFAMILY AF0104/ALDC/Ptd012-like 139 258 - -
Lan6g1313 324 MobiDBLite consensus disorder prediction 31 58 - -
Lan6g1313 324 Pfam Plants and Prokaryotes Conserved (PCC) domain 141 254 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1313 Lan-Chr6 14343473 14347937 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1313 1 318 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 60.116 6.70e-120 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1313 - - gmx:100794202 473.011