Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1297 ATGAATACATTTTCACATGTTCCTCCCGGCTTTCGGTTTCACCCAACCGATGAAGAACTTGTTGATTACTATCTTAGGAAAAAGGTAACATCTAAAAGGATTGATGTAGATGTCATCAAAGATGTGGATCTCTATAAAATTGAACCATGGGATCTTCAAGAATTATGCAAAATAGGAACCAATGAACAAAGTGACTGGTATTTCTTTAGTCATAAGGATAAGAAGTATCCAACTGGAACTCGTACAAATAGAGCTACAAAAGCTGGATTTTGGAAAGCCACAGGAAGAGATAAGGCAATATACACTAAACATTGCCTCATTGGGATGAGAAAGACTCTAGTCTTTTATAAAGGAAGAGCTCCAAATGGACAAAAATCTGATTGGATCATGCATGAGTATCGGCTAGAAACTAATGAAAATGGAACTACTCCGGAAGAAGGCTGGGTTGTATGTAGAGTGTTCAAGAAGAGAATGCCAACAATGAGAAAAGTGGGAGAGTATGAGTCATGGTATGATGATCAAGTTTCCTTAATGCAAGATCTTGAATTTCCAAGGCCAATCTATCACCACCCTACTTATGCATCACCATACCAACAACATAGTCATCACTGCAAGGGAGAGCTGGAATTGCAATACAACATGCCCCATGATGCTAATTTCCTACAACTTCCACAGCTAGAAAGCCCTAAAGTTCCTTATGGTAACTTTGATAGTAGTAATAGCAATGGAACTACGACATTGCAATTCTCATCTCTGATACAAGAAGATCAGGCACAGACACAACATTGCCATCATCACCAAAATCTGCACTCGATTTATGGTAACAATGATGAAGCTGCAGCGGAACAAGTGACTGATTGGCGAGTACTTGACAAATTTGTTGCTTCCCAGCTAAGTAACGATCAAAATGCTTCCAATGCAGCTATTCTCCATGTTGCTGAACAAATTACTATGCTCGCAAACGGATCGAAAAGGGCTCAAACTTCACAGGAATATGCTTCAACACCCACCTCCAGTGACCAGAATGACCTGTGGAAGTGA 1041 0.3987 MNTFSHVPPGFRFHPTDEELVDYYLRKKVTSKRIDVDVIKDVDLYKIEPWDLQELCKIGTNEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYTKHCLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNENGTTPEEGWVVCRVFKKRMPTMRKVGEYESWYDDQVSLMQDLEFPRPIYHHPTYASPYQQHSHHCKGELELQYNMPHDANFLQLPQLESPKVPYGNFDSSNSNGTTTLQFSSLIQEDQAQTQHCHHHQNLHSIYGNNDEAAAEQVTDWRVLDKFVASQLSNDQNASNAAILHVAEQITMLANGSKRAQTSQEYASTPTSSDQNDLWK* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1297 346 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Lan6g1297 346 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 4 324 - -
Lan6g1297 346 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
Lan6g1297 346 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
Lan6g1297 346 MobiDBLite consensus disorder prediction 327 346 - -
Lan6g1297 346 Gene3D NAC domain 16 159 IPR036093 GO:0003677|GO:0006355
Lan6g1297 346 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1297 Lan-Chr6 13734118 13738942 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1297 1 346 NAC Transcription Factor Family AT1G12260 56.077 1.53e-133 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan6g1297 NAM 2.6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1297 - - gmx:100783529 508.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0896 18 14250968 14254839 Lan6g1297 6 13734118 13738942 PCT
Lan6g1297 6 13734118 13738942 Lan18g0896 18 14250968 14254839 PCT