Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1289 ATGAAGTTATATACTTCATTATTGTTGCTTGGTTTGGTTTCCAGTTTCTCTTTTGTGGCTTCTAATATTGTGGCATCAAATGAAGTTTTGGCACTTAAAGCTTTCAAAGAAGCTGTGTTTGAAGATCCACATCAACTTTTGTCCAATTGGAATTCACTGGTTTCAGATCCTTGTGATTGGTATGGTCTTTTATGCACCCCGGCTCAAGATCATGTTATCAAAATAAACATCCCAGGGTCATCATTAGGGGGATTTCTTGCACCGGAACTGGGGCGAATCACCTACCTGCAAGAATTGGTCTTGCATGGCAACAATCTTCTTGGAACAATACCGAAAGAGTTGGGCATGTTGAAATATCTCAAGGTGTTGGATTTGGGAATGAATCAGTTATCAGGATCAATTCCACCAGAGATTGGACATTTGACCCAAATTATGAAAATAAACCTGAATTCCAATGGGCTGACTGGTAGGTTACCCACAGAGCTCGGAAATTTGAGATACCTTCAAGAACTGCGGCTGGATAGGAATAAGCTTCAAGGACCAGTTCCTGCTGGTGGAAGTTTTGCTTCAAACATAGCTAATCCGAATGACTCAAATGTGACTTCAACTGGCCTTTGTCGTTTGTCTCAGTTAAAAGTTGCAGATTTTTCATATAACTTCATTTCTGGTAGCATACCCAAATGTTTGGAGCATCTTCCAAGATCAAGTTTCCAAGGGAATTGCCTCCGGAGAAAAGACGTAAAGCAGCGGACTTCTGCGCTATGTGCTGCCAAGAGCCATCCAGTTGCAAACACAATGCACCGGTCTTCTGAATCCAAACATCAAGGACCGTCAAAACCTGCTTGGCTTTTGGCTGTTGAAATAGTGACAGGAACCATGATCTGTTCTTTATTTGTGATTGCAATTCTCACTGCTTTGCGAAGGGGTAACAACAAAGCATCGATCATTATTCCTTGGAAAAAATCGACAAGTGAGAAAGATCATATTCTAGTACATATAGACACTCAGCTGTTGAAGGATGTGACGAGGTGTAGCAGACAAGAGCTTGAAGTGGCCTGTGAAGACTTCAGCAACATAATTGGGTCCTCGTCAGATAGTTTGGTCTATAAGGGTACAATTGAAGGTGGACCTGAGATTGCTGTAATCTCTCTATGCATAAAGGAAGAGCACTGGACAGGATACCTCGAGCTCTATTTTCAGAGAGAGGTGGCAGACTTGGCAAGGTTAAATCATGAAAATACTGGAAAACTACTCGGCTATTGTAGAGAGAGCAATCCATTTACGAGGATGCTGGTTTTTGACTATGCATCAAATGGGACACTTTATGAGCACCTACATTGTTATGAAGACAGGTGCCAGTTAACTTGGAGACGGCGCATGATAATTATTATCGGAATTGCACGTGGACTCAAGTACTTGCACACAGAAATTGAGCCACCATTCACTATCTCGGAGTTGAATTCCAATGCTGTATACCTCACAGAAGATTTTTGCCCTAAGCTGGTTGATTTTGAAAATTGGAAGACAATTCTTGAAAGATCAGAAAGAAATTCCGGTTCCATTGGGAGCCAAGGTTCTGTTTCTGCTCTTTCGACTACGTTTGAGGCGCGCCATCTCGATACCAAAGGAAATGTTTTTGCTTTTGCTGTACTTCTACTAGAGATAATCAGTGGTAGACCTCCATACTGCAAGGACAAAGGGTACTTGGTGGATTGGGCCAGGGACTATATTGAAAAGCCAGAAAAAATGTCACATTTGGTAGATCCAGAGTTGGAACATTTTAGAGATGATGACCTGAAAGTAATATGTGAAGTTATAACTTTTTGTATCAGTTCTGACCCCACAGTCCATGCATCAATGCAAGAAATATGCAGCATGTTGGAGAGTAGAATTGACACATCAATAAGTTTGGATTTCAAGTCATCATCATCTTTGGCTTGGGCTGAACTTGCACTTTCATCATAA 1965 0.4137 MKLYTSLLLLGLVSSFSFVASNIVASNEVLALKAFKEAVFEDPHQLLSNWNSLVSDPCDWYGLLCTPAQDHVIKINIPGSSLGGFLAPELGRITYLQELVLHGNNLLGTIPKELGMLKYLKVLDLGMNQLSGSIPPEIGHLTQIMKINLNSNGLTGRLPTELGNLRYLQELRLDRNKLQGPVPAGGSFASNIANPNDSNVTSTGLCRLSQLKVADFSYNFISGSIPKCLEHLPRSSFQGNCLRRKDVKQRTSALCAAKSHPVANTMHRSSESKHQGPSKPAWLLAVEIVTGTMICSLFVIAILTALRRGNNKASIIIPWKKSTSEKDHILVHIDTQLLKDVTRCSRQELEVACEDFSNIIGSSSDSLVYKGTIEGGPEIAVISLCIKEEHWTGYLELYFQREVADLARLNHENTGKLLGYCRESNPFTRMLVFDYASNGTLYEHLHCYEDRCQLTWRRRMIIIIGIARGLKYLHTEIEPPFTISELNSNAVYLTEDFCPKLVDFENWKTILERSERNSGSIGSQGSVSALSTTFEARHLDTKGNVFAFAVLLLEIISGRPPYCKDKGYLVDWARDYIEKPEKMSHLVDPELEHFRDDDLKVICEVITFCISSDPTVHASMQEICSMLESRIDTSISLDFKSSSSLAWAELALSS* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1289 654 Gene3D Phosphorylase Kinase; domain 1 329 435 - -
Lan6g1289 654 SUPERFAMILY L domain-like 27 233 - -
Lan6g1289 654 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 654 - -
Lan6g1289 654 Pfam Protein tyrosine and serine/threonine kinase 357 625 IPR001245 GO:0004672|GO:0006468
Lan6g1289 654 ProSiteProfiles Protein kinase domain profile. 354 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1289 654 PANTHER PROTEIN MALE DISCOVERER 2 7 654 - -
Lan6g1289 654 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Lan6g1289 654 Gene3D Transferase(Phosphotransferase) domain 1 436 642 - -
Lan6g1289 654 SUPERFAMILY Protein kinase-like (PK-like) 341 628 IPR011009 -
Lan6g1289 654 Gene3D Ribonuclease Inhibitor 27 140 IPR032675 -
Lan6g1289 654 Gene3D Ribonuclease Inhibitor 141 264 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1289 Lan-Chr6 13519469 13523763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1289 26 628 Receptor kinase-like Gene Family AT2G01210 26.180 2.40e-51 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Lan6g1289 PK_Tyr_Ser-Thr 2.1e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1289 - - gmx:100779744 976.467