Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1287 ATGATTTATAAGGTTAGAATGGGTTGTAACTTTTCGAAGTACATTGCATGCTGCTGGAGTACAGAGAAGCAGCAAGATCGTCCGGTTCCTGAGGTTCAAGATGACGAAAATGAAGACAACAATGAGGGCAGTGATTTGCTACCATTTCATGAATTCACATTTGGTCAGCTGAAGAATGCTACATCTGGATTTGCAGTGGAAAATATAGTTTCCGAGCATGGAGAGAAGGCACCAAATGTGGTCTATAAAGGGAAACTTGAAAACCAAATGCGAATTGCTGTGAAACGGTTCAACAGATCAGCCTGGCCAGATGTCCTGCAATTTTTAACTGAGGCCAGGTCTGTTGGTCAATTAAGGAACCAAAGATTGGCAAATCTGCTTGGATGTTGCTGTGAAGGTGAAGAGAGGTTACTTGTTGCAGAATATATGCCCAATGACACTTTGGCAAAGCATTTGTTCCATTGGGAAACTCAGCCCATGAAATGGGCAATGCGACTGAGAGTTGCTTTGCACCTTGCCCAAGCTCTAGAGTACTGTACCAACAAAGGACGTGCTCTATATCATGATCTAAATGCTTACAGAGTTCTATTTGATGATGAATACAATCCTAGACTTTCATGCTTTGGTTTGATGAAAAACAGTCGAGATGGGAAAAGTTATAGTACAAATTTGGCATTTACTCCACCCGAGTATCTAAGGACAGGTAGAGTTACACCAGAGAGTGTAACTTACAGCTTTGGGACCCTTTTGCTTGACCTTCTCAGTGGAAAGCATATCCCTCCAAGCCATGCTCTTGAACTGATAAGGAACAGGAACCTTCCGATGCTAACAGACTCTTGTTTAGAAGGACAATTTACAAATGATGAGGGGACAGAATTACTTCGTCTGGCCTCACGATGTTTGCAGTCTGAACCGCGAGAGCGCCCTAATCCAAAGTCATTGGTCACTGCTCTTACACCTCTGATGAAGGATTCAGAGGTTCCTTCTCATGTGCTGATGGATATACCAGATGTCAGTGCTGCAGCTCCCCTTTCTTCGCTTGGTGAAGCTTGTCAACGGATGGATCTTACTGTCTTACATGAGGTGGTGGAGAAACTTGGGTATAAAGATGATGATGGGACAGAGACCGAGCTTTCATTCCAAATGTGGACAAATCAGATGCAGGATACATTGAATTCGAAGAAGAAAGGGGATGCTGCTTTTCGGCAGAAGGACTTTAAAACTGCTATTCATAGATATACACAGTTCATCGAGGTTGGAACAATGGTTTCACCGACAATTTATGCACGTCGTAGTCTATCATATCTCATTAACAACATGCCGGAAGAAGCACTTACTGATGCATTGCAGGCACAAATAATATGTCCTGTTTGGCACATAGCATCTTATTTACAAGCTGTCTCTCTTATAGCACTCGGCAGGGATCGTGAAGCCCGAATGGCACTTAAAGAGGGTACTTCACTAGAAACTAAAATGAAAACAGATAAGTAG 1491 0.4279 MIYKVRMGCNFSKYIACCWSTEKQQDRPVPEVQDDENEDNNEGSDLLPFHEFTFGQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQMRIAVKRFNRSAWPDVLQFLTEARSVGQLRNQRLANLLGCCCEGEERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHLAQALEYCTNKGRALYHDLNAYRVLFDDEYNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVTYSFGTLLLDLLSGKHIPPSHALELIRNRNLPMLTDSCLEGQFTNDEGTELLRLASRCLQSEPRERPNPKSLVTALTPLMKDSEVPSHVLMDIPDVSAAAPLSSLGEACQRMDLTVLHEVVEKLGYKDDDGTETELSFQMWTNQMQDTLNSKKKGDAAFRQKDFKTAIHRYTQFIEVGTMVSPTIYARRSLSYLINNMPEEALTDALQAQIICPVWHIASYLQAVSLIALGRDREARMALKEGTSLETKMKTDK* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1287 496 Gene3D Tetratricopeptide repeat domain 388 496 IPR011990 GO:0005515
Lan6g1287 496 PANTHER TPR DOMAIN KINASE 7 494 - -
Lan6g1287 496 Gene3D Transferase(Phosphotransferase) domain 1 144 335 - -
Lan6g1287 496 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 7 494 IPR045845 GO:0004672|GO:0009742
Lan6g1287 496 SUPERFAMILY Protein kinase-like (PK-like) 41 329 IPR011009 -
Lan6g1287 496 Pfam Protein tyrosine and serine/threonine kinase 80 317 IPR001245 GO:0004672|GO:0006468
Lan6g1287 496 ProSiteProfiles Protein kinase domain profile. 67 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1287 496 SUPERFAMILY TPR-like 392 489 IPR011990 GO:0005515
Lan6g1287 496 Gene3D Phosphorylase Kinase; domain 1 37 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1287 Lan-Chr6 13471127 13481494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1287 30 318 Glycoside Hydrolase AT3G07070 33.651 1.49e-44 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Lan6g1287 PK_Tyr_Ser-Thr 4.6e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1287 K14500 - gmx:100797107 797.349