Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan6g1263 | ATGGATAACTTAAACGGGTTTCCTCGGGGAAGTGTGTTTGAAGGTAGCCAGCTTGCGTCTCTGGTGAATTGGATAAATGCGGTGCTTCCTAACTATAATCTTCCCTTAGAAACTTCAGAGGAGGAATTGCGGTCGTGGCTGAGGGATGGATCTGTATTATGCAGTATTTTGGACAAGCTGGTTCCTGGTTCAGTGGAAAGTGGAAATGGTTCTTTGGAAGAGCTGATGAGTGTTAAAAGGTTTCTCGTCGCATTGGATGATTTGGGATTGCCCGGATTTGATTTGTCAGACCTTGTGCAGGGATCCATGTTGCCTGTGTTGCACTGCCTTGAGACTCTGAAAACTCATTTTGCTTGTAATGCTGCTCGGGAAAATATCCAAAGTTCTAGAAAGAGGTGGGACCGGTCAGATCTAACACCCTTAGAGGAAACTGATAGTTGCCTCAAGGATGCTTCAAAAATCCAACGTGCTATTGACGGTTCTGTTGTATCAGATGAAGTTGCTTCCTTAGATGGATTGAAATCTAATGAACTGTCCCAATTGAAGCGAGGATCGCATGTGGATCTTTCAGATGCTAAACTTATGGAATTAGTAAAATCAAACAGTTTGGATACTACCTCAACTGAATTGCTTTTTAACATAGGAAATAGGATCCTTGGTGATATCTTTGAAAGGAAGAATGGAGATGTACCTCATGCTCAGCGTGCAGCATGCCTGTTGAGGAAAATTTTGCAAGTAATTGAGTTGCGCTATTCAAATCAAGCGGAAGGCTTGAAAAATCAAAACAATCTTTTCAAGGCTCGTGAGGGAAAGTACCAATTGAGAATGAATGCACTTGAAACCCTTGCTGAAGGGACAACTGAAGAGAATGAGGTTGTTACAGGTTGGGTTCAGCAGATGAAGTTTACTTTGCAGCTTGAACAAAATAAATTTGAGGAGAAGAAGAAACTCGAAGACCAGGATTTTTCTCGATTAAAGAAAGAAAAAATTCGTAATGAAATTGAAATTTCTGCATTGAAGCAAGAGTTAGAAATGGCCAGAGGAACGCATGAAGGACAGGTTTTGCAGTTGGAATTGCAAGCTAATGAATCTAAAGCTGAATATGAGAAAAAGATCCAGGAACTTCAGCGTCATTTGGCCAACGCAAGGAAACGTGTGAAGGATCTGGAGGCATCTTCAGAATCCACATATTTGAAATGGAAGAATAAAGAACATACCTATCAAAGTTTCTTAAATTCCCAACATAGAGTTATCCAGAAATTGAGAGCTGGGATGAAGTCCATAAAAAATGAAGTGATAAAAACAAAAGGAAGCTACATGGAGGAATTCAAGTACTTTGGAATCAAGCTTAAAGGTCTAGCTGAGGCTGCTGAAAATTATCATGTAGTTCTGGCAGAAAATCGAAAATTGTATAATGAAGTTCAAGATTTGAAAGGAAATATCAGGGTATATTGTCGAGTTAGGCCATTTCTTCCTGGGCAAAGTCAAAAACACTCAACAGTTGAGTTTGTTGGTGATGATGGAGATTTAGTTATTAGCAATCCTCTTAAACCAGGAAAAGAAAGTCGCAAACATTTTAAATTTAACAAAGTATTTGGTCAAGTATCTACTCAAGAGGAAGTATTCATTGACACTCAACCACTAATTCGTTCTGTTCTTGATGGATATAATGTGTGTATATTTGCTTATGGTCAAACCGGCTCAGGAAAGACGTATACAATGAGTGGACCAAGCCTATTATCAAATTCAGATTGGGGAGTAAACTATCGAGCACTTCATGATCTTTTCCATATCTCCCAGAGTAGGAGAAGCTCTATTATTTATGAAGTTTGTGTGCAAATGGTTGAAATTTATAACGAACAAATTCGTGATCTACTATCAAGCAATGGTTCTCAGAAAAGACTTGGGATTTGGAATACTACCCAACCAAATGGGTTGGCTGTTCCTGATGCAAGTATGCATTCTGTGAATTCAATGACTGATGTCCTCGAGTTGATGAATACCGGGTTGACGAACCGTGCAACTAGTGCAACAGCCTTAAACGAAAGAAGCAGCAGATCACACAGTGTTCTCTCTGTTCATGTTCGCGGAACGGATTTGAAGACCAACTCTCTCTTGCGTGGATGTCTGCATCTTGTAGATCTTGCAGGAAGCGAAAGAGTGGATCGTTCTGAAGCAACTGGTGATAGGCTTAAGGAGGCTCAACATATAAACAAATCACTATCAGCACTTGGAGATGTGATATTTGCTCTAGCACAGAAGAGTGCCCATGTGCCGTATAGGAATAGCAAGTTGACTCAGCTTCTTCAGAGTTCATTGGGTGGTCAAGCGAAAACCCTGATGTTTGTACAGCTTAATCCTGATGTTGCCTCATACTCTGAAACTATAAGCACCTTGAAGTTTGCTGAGAGAGTTTCTGGTGTTGAATTAGGTGCTGCTCGCAGCAACAAAGAGGGAAAGGATGTGAGAGAACTTATGGAACAGGTGGCATCTCTTAAGGATACAGTTGCAAGGAAGGATGAAGAGATTGAGCGGTTGCAGTCACAGAAGGCTAATCACAATGGTTCAAATTCAAAGCCTGGTATGATCTCACTAAGGCGTGACTTATCATCCCCAAGAAGACATTCTATAGGGACTCCCCGACACAGCATGAGACTTTTTCGAGCAAGGAGCTCTGGAGACAAAGAGAAAGCGGCTTCTGACGTGGACAACTGCTCAGCGTATAGTGATAAGCATTCAGAAGCTGGTTCTCATCAATCAATGGATGATTTCAGGAACAGGTCTAGTCTTCTACAGTTGAAATTAGACAGCGAAGATACCATTCAAAATTTCAATGAGGACGTTGAACTCTTAGGATTTGGAGATGCGGATTCGGAGGAGAGATTAAGTGACATATCTGATGGTGTTCTTTCAATGGGAACAGAAACTGATGGTTCAATCAGCAGTATTGTGGAGTACACTCTTTTTCCCGAAGTTGATAAGGAAGCTGAAACTACACCTGCTAAGAACACAAAAGCAGGCGACCTTCGAGCTGAGAACACGGAAAAAGCCATTGTAGCATCCAAAATTCCCAAAGCTCCACAAGACCCACCAAAACTGCAGCCAAGACCTTCCAGGCTATCAATGAACAGAAGCTCCTCAAAATCTTTATCAAGTCTTAGAAAACCCACAGCTAGTAGTAGCTCTACCTTGGCGAAGTCCTCTAAAAGATGGCAATAG | 3219 | 0.4116 | MDNLNGFPRGSVFEGSQLASLVNWINAVLPNYNLPLETSEEELRSWLRDGSVLCSILDKLVPGSVESGNGSLEELMSVKRFLVALDDLGLPGFDLSDLVQGSMLPVLHCLETLKTHFACNAARENIQSSRKRWDRSDLTPLEETDSCLKDASKIQRAIDGSVVSDEVASLDGLKSNELSQLKRGSHVDLSDAKLMELVKSNSLDTTSTELLFNIGNRILGDIFERKNGDVPHAQRAACLLRKILQVIELRYSNQAEGLKNQNNLFKAREGKYQLRMNALETLAEGTTEENEVVTGWVQQMKFTLQLEQNKFEEKKKLEDQDFSRLKKEKIRNEIEISALKQELEMARGTHEGQVLQLELQANESKAEYEKKIQELQRHLANARKRVKDLEASSESTYLKWKNKEHTYQSFLNSQHRVIQKLRAGMKSIKNEVIKTKGSYMEEFKYFGIKLKGLAEAAENYHVVLAENRKLYNEVQDLKGNIRVYCRVRPFLPGQSQKHSTVEFVGDDGDLVISNPLKPGKESRKHFKFNKVFGQVSTQEEVFIDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPSLLSNSDWGVNYRALHDLFHISQSRRSSIIYEVCVQMVEIYNEQIRDLLSSNGSQKRLGIWNTTQPNGLAVPDASMHSVNSMTDVLELMNTGLTNRATSATALNERSSRSHSVLSVHVRGTDLKTNSLLRGCLHLVDLAGSERVDRSEATGDRLKEAQHINKSLSALGDVIFALAQKSAHVPYRNSKLTQLLQSSLGGQAKTLMFVQLNPDVASYSETISTLKFAERVSGVELGAARSNKEGKDVRELMEQVASLKDTVARKDEEIERLQSQKANHNGSNSKPGMISLRRDLSSPRRHSIGTPRHSMRLFRARSSGDKEKAASDVDNCSAYSDKHSEAGSHQSMDDFRNRSSLLQLKLDSEDTIQNFNEDVELLGFGDADSEERLSDISDGVLSMGTETDGSISSIVEYTLFPEVDKEAETTPAKNTKAGDLRAENTEKAIVASKIPKAPQDPPKLQPRPSRLSMNRSSSKSLSSLRKPTASSSSTLAKSSKRWQ* | 1073 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan6g1263 | 1072 | Pfam | Kinesin motor domain | 486 | 806 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Lan6g1263 | 1072 | Gene3D | - | 14 | 120 | IPR036872 | - | |
Lan6g1263 | 1072 | MobiDBLite | consensus disorder prediction | 1038 | 1072 | - | - | |
Lan6g1263 | 1072 | PRINTS | Kinesin heavy chain signature | 555 | 576 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Lan6g1263 | 1072 | PRINTS | Kinesin heavy chain signature | 678 | 695 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Lan6g1263 | 1072 | PRINTS | Kinesin heavy chain signature | 709 | 727 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Lan6g1263 | 1072 | PRINTS | Kinesin heavy chain signature | 758 | 779 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Lan6g1263 | 1072 | Gene3D | Kinesin motor domain | 422 | 810 | IPR036961 | - | |
Lan6g1263 | 1072 | PANTHER | P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN | 13 | 1072 | - | - | |
Lan6g1263 | 1072 | PANTHER | KINESIN-LIKE PROTEIN KLP-3 | 13 | 1072 | - | - | |
Lan6g1263 | 1072 | SUPERFAMILY | Calponin-homology domain, CH-domain | 15 | 120 | IPR036872 | - | |
Lan6g1263 | 1072 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 480 | 846 | IPR027417 | - | |
Lan6g1263 | 1072 | MobiDBLite | consensus disorder prediction | 849 | 864 | - | - | |
Lan6g1263 | 1072 | Pfam | Calponin homology (CH) domain | 19 | 118 | IPR001715 | GO:0005515 | |
Lan6g1263 | 1072 | Coils | Coil | 322 | 342 | - | - | |
Lan6g1263 | 1072 | Coils | Coil | 822 | 856 | - | - | |
Lan6g1263 | 1072 | MobiDBLite | consensus disorder prediction | 887 | 901 | - | - | |
Lan6g1263 | 1072 | ProSiteProfiles | Calponin homology (CH) domain profile. | 15 | 118 | IPR001715 | GO:0005515 | |
Lan6g1263 | 1072 | Coils | Coil | 354 | 392 | - | - | |
Lan6g1263 | 1072 | SMART | ch_5 | 17 | 116 | IPR001715 | GO:0005515 | |
Lan6g1263 | 1072 | MobiDBLite | consensus disorder prediction | 995 | 1072 | - | - | |
Lan6g1263 | 1072 | ProSiteProfiles | Kinesin motor domain profile. | 480 | 808 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Lan6g1263 | 1072 | MobiDBLite | consensus disorder prediction | 847 | 923 | - | - | |
Lan6g1263 | 1072 | SMART | kinesin_4 | 478 | 816 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan6g1263 | Lan-Chr6 | 13092292 | 13100611 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan6g1263 | 448 | 842 | Calmodulin-binding Proteins | AT5G65930 | 39.950 | 2.96e-74 | 266 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan6g1263 | K10406 | - | gmx:100812813 | 1608.96 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lan18g0212 | 18 | 2107551 | 2121533 | Lan6g1263 | 6 | 13092292 | 13100611 | LSH |