Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1254 ATGGATGAGATTGCATACTTCATGGACTGGGATTTGGAAGCTATTGTGAGAGGAAGCACAAGTGAATCAGCACCATCTGCAACAACAATCATGGAGGACCCATATCTTAATTTTTCTCAATTTTGTTCTGAACAAAATGAGATAGTTTGGAGTTTCCCTGAATTCTCAGAAACCACAAAGGTCCTTGATGAATTGCAAGACCTTTATAAACCATTTTACCCAGTTTTGCACCCTCTTTCTACCCAGACAATCCTCACAAGTAATTCCCTACCTATACCCAAAGAACCCCAAGAATTCAAAGTTCATAAAGCATCAGAGGAAATAACTCCACATGATCAGTTGCAAATTCCCATAGTATCTAAATCCAAAAAAAGCAAGAAGAACAAGGTGATGAAGCAAGTAACAACAGAAAATGGCACTTGTGATTCATGGGCATGGCGAAAATATGGCCAGAAACCAATCAAAGGTTCACCTTATCCCCGAAGCTACTACAAGTGCAGCACTTCCAAAGGATGCTTGGCTAGGAAACAAGTTGAAAGAAGCCATTTGGACCCTCAAGTTTTCTTGGTTACCTACACAGCAGAACATAGCCATCCACACCTAGCTCCCAGAAACTCACTAGCAAGTAGAACAAGGAAGAACAACAATTCTATAGTTGCATCTCAAAATACTCTTGACCAAAAAAGCACTTGTTCTTCAAGCTCCTCCGCAATGATTCTCTCTCAGAATACACCTTTGGATGAGGTTGAGATGGTGACAAGTGTGGAACAAAGTAAGGGCTTGATGAAAGAAGAAGAATTTCTTGAGTTGTTGGATGAGGCTGAATTAGGTCATGGTTGGTTTTCAAGCACAGAGCTAGAGGAACTGATAGGGGATTTGACCGAAAACTTGAATTAG 897 0.4058 MDEIAYFMDWDLEAIVRGSTSESAPSATTIMEDPYLNFSQFCSEQNEIVWSFPEFSETTKVLDELQDLYKPFYPVLHPLSTQTILTSNSLPIPKEPQEFKVHKASEEITPHDQLQIPIVSKSKKSKKNKVMKQVTTENGTCDSWAWRKYGQKPIKGSPYPRSYYKCSTSKGCLARKQVERSHLDPQVFLVTYTAEHSHPHLAPRNSLASRTRKNNNSIVASQNTLDQKSTCSSSSSAMILSQNTPLDEVEMVTSVEQSKGLMKEEEFLELLDEAELGHGWFSSTELEELIGDLTENLN* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1254 298 ProSiteProfiles WRKY domain profile. 135 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan6g1254 298 Gene3D WRKY domain 122 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan6g1254 298 SUPERFAMILY WRKY DNA-binding domain 137 200 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan6g1254 298 SMART WRKY_cls 140 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan6g1254 298 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 9 264 IPR044810 GO:0003700
Lan6g1254 298 Pfam WRKY DNA -binding domain 142 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan6g1254 298 PANTHER WRKY TRANSCRIPTION FACTOR 63-RELATED 9 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1254 Lan-Chr6 12896025 12897717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1254 1 298 WRKY Transcription Factor Family AT4G23550 40.127 4.07e-52 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan6g1254 WRKY 1.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1254 K13426 - gmx:102663255 303.523