Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1245 ATGGAACAGAAAAGTCTTCTGATATCAGCACTAAGTGTAGGGGTAGGTGTGGGAGTGGGACTTGGATTGGCATCAGGACAAAGTGTTACTAAATGGGGAGGGAATAATTCTTCTTCAAACTCAATTACTGCTGAGAACATAGAACAAGAAATGCTAAGACAAGTTGTTGATGGAAGAGAAAGCAATGTCACTTTTGATAAATTCCCTTATTATCTCAGTGAGCAAACACGAGTCTTGCTAACTAGTGCTGCTTATGTTCATTTAAAGCATGCAGAGGTTTCTAAATATACGCGTAATCTTGCTCCTGCAAGCCGAACTATTTTGCTTTCTGGGCCAGCAGAACTTTACCAACAGATGCTTGCCAAGGCTTTAGCTCATTACTTTGACGCGAAGTTGCTTCTGTTAGATTTAACTGATTTTTCATTGAAGATTCAGAGTAGATATGGATCTTCTAACAAAGAATCTTCTTTCAAAAGATCCACTTCAGAGACGACTTTGGAGCGATTATCTGACTTATTTGGATCATTTTCAATCTTTCCACAGAAGGAGGAACCTAAAGTGAAAATGCACAGGCAAGGCAGTGGAGTGGACCTTCAATCAATGGGGACTGAAGCGTCTGGTAATCCTCCAAAGCTCCGAAGAAATGCTTCTTCCTCTTCAAATATAAGCAGCCTTGGTTTGCAAAGCAATACTGCAAATCCAGCTCCTCTTAGGCGCACATCCAGTTGGTCTTTCGATGAAAAGCTTCTTATACAGACTCTCTATAAGGTTCTGGTTTTTGTGTCAAAAACCTTTCCAATTGTGCTATATCTGCGGGATGTCGATAACTTGTTACATAGATCACAAAGGATATACAAATTATTCCAGAAAATGTTGGAGAAACTATCTGGACCAATTTTGATTCTCGGTTCACGAGTTCTGGATTCCGGTAATGACTATGTAGAGGAGGATGAGAAGCTTGCTTCACTCTTTCCATACAACATAGAAATCAGGCCACCGGAAAGTGAGTCACATCTTGTCAGCTGGAAGTCTCAGTTGGAAGAGGATATGAAGAGGATACAAGTTCAGGATAACAGGAACCATATCATTGAAGTGCTTGCAGCCAATGATCTTGATTGTGATGACCTGGATTCCATCTGTGTGGAAGACACAATGGTTCTTAGTAACTATATAGAAGAGATTATCGTGTCTGCGATTTCTTATCATTTGATGAAAAACAAAGAACTTGAATACAGAAATGGGAAACTTGTTATTTCCGGCAAAAGTTTGTCCCATGCTTTGAGCATATTCCACAAGGGAAAGTCCAGTGGAAGTGATACATTGAAATTGAAAGATCAAGCCGTAAAACCTGAGATGAAAAAAGGGGAAGGAAATGTTGTGAAACCAGAAGCCAAGTCTGAAATTGCTGCTCCTGTGAAAAAGGCTGAAACAGGATCAACTTCAGTGGGAAAAACAGACAATGAAAAATCAGTTCCAGCATCCAAAGCTTCTGAAGTTCCTCCTGATAATGAGTTTGAGAAGCGAATAAGGCCTGAGGTAATACCAGCGAATGAGATTAATGTCACATTTTCTGACATTGGTGCTTTAGATGAGACAAAAGAATCACTTCAAGAACTAGTAATGCTTCCTCTTCGAAGGCCGGACCTTTTCACTGGAGGACTTCTAAAGCCTTGTAGAGGAATATTACTATTTGGACCACCAGGCACTGGGAAGACGATGCTGGCGAAGGCAATTGCAAAGGAGGCTGGAGCAAGTTTCATCAATGTATCCATGTCTACCATCACTTCTAAATGGTTTGGTGAAGATGAGAAGAATGTTCGCGCTTTGTTCTCACTTGCAGCCAAGGTTTCCCCGACTATTATTTTTGTGGATGAGGTTGATAGCATGCTTGGACAAAGGACCAGAGTTGGAGAGCATGAGGCCATGAGGAAAATAAAGAATGAATTCATGAGTCACTGGGATGGGCTTATGACAAAACCCGGAGAGCGCATCCTTGTTCTTGCGGCAACCAATAGGCCATTTGACCTGGATGAAGCTATTATTAGGCGATTCGAAAGGAGAATTATGGTAGGGCTACCATCAGTGGAGAACAGGGAAAAGATTTTAAGGACTCTTTTGGCAAAAGAACAGGTTGATGAGGAAATTGATTTTAAGCAACTGGCAACTATAACAGAAGGATATACTGGAAGTGATCTAAAGAACTTGTGCACAACTGCAGCTTATCGACCTGTTAGAGAGTTAATTGCCCAAGAGAGGCTCAAAAATATGGATAAGAAGCAGAAAGATAAAGCTACCAAGGATCAAAACAAAGATGTTCAAGACAGAAATAAACAGGGTGCTGTGGATACAGAACAGGAAGCTAAACAGGAAAGAGTTATCACACTTAGGCCATTGAATATGCAGGATTTCAGAGAGGCAAAGAATCAGGTTGCTGCAAGCTTTTCAGCTGAGGGGGCTGGAATGAGCGAGTTGAAGCAGTGGAACGAATTGTATGGAGAAGGTGGTTCAAGGAAACAAAAGCAATTGTCTTACTTTTTATGA 2541 0.4101 MEQKSLLISALSVGVGVGVGLGLASGQSVTKWGGNNSSSNSITAENIEQEMLRQVVDGRESNVTFDKFPYYLSEQTRVLLTSAAYVHLKHAEVSKYTRNLAPASRTILLSGPAELYQQMLAKALAHYFDAKLLLLDLTDFSLKIQSRYGSSNKESSFKRSTSETTLERLSDLFGSFSIFPQKEEPKVKMHRQGSGVDLQSMGTEASGNPPKLRRNASSSSNISSLGLQSNTANPAPLRRTSSWSFDEKLLIQTLYKVLVFVSKTFPIVLYLRDVDNLLHRSQRIYKLFQKMLEKLSGPILILGSRVLDSGNDYVEEDEKLASLFPYNIEIRPPESESHLVSWKSQLEEDMKRIQVQDNRNHIIEVLAANDLDCDDLDSICVEDTMVLSNYIEEIIVSAISYHLMKNKELEYRNGKLVISGKSLSHALSIFHKGKSSGSDTLKLKDQAVKPEMKKGEGNVVKPEAKSEIAAPVKKAETGSTSVGKTDNEKSVPASKASEVPPDNEFEKRIRPEVIPANEINVTFSDIGALDETKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMSHWDGLMTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSVENREKILRTLLAKEQVDEEIDFKQLATITEGYTGSDLKNLCTTAAYRPVRELIAQERLKNMDKKQKDKATKDQNKDVQDRNKQGAVDTEQEAKQERVITLRPLNMQDFREAKNQVAASFSAEGAGMSELKQWNELYGEGGSRKQKQLSYFL* 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1245 846 MobiDBLite consensus disorder prediction 447 503 - -
Lan6g1245 846 CDD AAA 559 692 - -
Lan6g1245 846 MobiDBLite consensus disorder prediction 447 461 - -
Lan6g1245 846 ProSitePatterns AAA-protein family signature. 664 683 IPR003960 GO:0005524|GO:0016887
Lan6g1245 846 Gene3D - 520 817 IPR027417 -
Lan6g1245 846 SMART AAA_5 557 694 IPR003593 -
Lan6g1245 846 MobiDBLite consensus disorder prediction 478 492 - -
Lan6g1245 846 MobiDBLite consensus disorder prediction 189 234 - -
Lan6g1245 846 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 846 - -
Lan6g1245 846 MobiDBLite consensus disorder prediction 755 788 - -
Lan6g1245 846 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 520 758 IPR027417 -
Lan6g1245 846 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 846 - -
Lan6g1245 846 Pfam ATPase family associated with various cellular activities (AAA) 561 691 IPR003959 GO:0005524|GO:0016887
Lan6g1245 846 Gene3D - 694 813 - -
Lan6g1245 846 MobiDBLite consensus disorder prediction 196 234 - -
Lan6g1245 846 Pfam AAA+ lid domain 715 756 IPR041569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1245 Lan-Chr6 12717991 12724939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1245 521 753 Calmodulin-binding Proteins AT3G56690 38.983 3.61e-43 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1245 - - gmx:100807464 1362.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0113 17 653762 659628 Lan6g1245 6 12717991 12724939 PCT