Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1242 ATGGCTTCGAATTCTACTTCTGGAAATGTTTGCCCTCCACCAATGAAACCCGCATCAAATGGGGTGTTTCAGGGGGATAACCCTCTTGATTTTGCACTTCCCCTGGCTATTTTACAGATATGTCTTGTTTTCGTTGTCACGAGGGGACTGGCTTATCTTCTAAGACCTTTAAGGCAGCCACGAGTTGTTGCAGAGATTGTTGGAGGAATAATACTTGGGCCATCAGCATTGGGACGGAATAAAAGCTATTTGCAAGCGATTTTCCCACCCAGGAGTCTTACAGTGTTAGATACTCTAGCGAACCTTGGCCTTTTGTTCTTTCTATTTCTAGCAGGTCTAGAGTTAGATCCTAAATCTTTGCGCAAAACTGGGAGTCAGGCCCTTGGCATTGCTATTGCTGGAATCAGCCTTCCCTTTGTATTAGGAATTGGTTCATCATATGTTCTCCAAGCAACAATTGCCAAAGGAGTAGATGCTACCGCATTTCTTGTATTTATGGGTGTTGCTCTTTCCATAACTGCTTTTCCCGTATTAGCTCGTATTCTGGCTGAGTTGAAACTTCTAACCTCCGATGTTGGCAGAACGGCTATGTCAGCAGCAGCAGTTAATGATATTGCTGCCTGGATTCTGCTTGCATTGGCTGTTGCCTTATCTGGTAGAAGTCAATCTCCATTTGTGTCATTGTGGGTCTTCTTAAGTGGATGTGGATTTGTCATTTGTTCAATTCTCATTGTCCCTCCAATTTTCAAATGGATGACACAGCGATGCCATGAAGGCGAGCCTGTCGACGAGAGATACATATGTGCTACATTAGTTGCTGTTCTGGCTGCTGGATTTGTTACAGATGCTATCGGAATCCATGCCATGTTCGGTTCTTTTGTTATTGGAGTTTTGGTTCCAAAAGATGGACCATTTGCAGGTGCTCTAGTAGAGAAACTAGAGGATCTTGTGTCGGGTCTTTTCCTCCCACTCTATTTTGTGTCAAGTGGATTGAAGACTGATATAGCCACCATTCAGGGGCTGCAATCATGGGGCCTGCTGGCTTTAGTTATTTTTACTGCCTGTTTTGGGAAGATTGTTGGGACTGTTGTGGTATCTTTTTTCTGTAAAGTACCTTTGAAGGAGTCTTTAGCACTGGGATTCCTAATGAACACTAAAGGTTTGGTTGAATTAATTGTCCTCAACATTGGTAAAGATAGAAAGGTTTTGAATGATCAGACCTTTGCCATTATGGTTCTGATGGCTCTCTTTACTACCTTCATTACCACTCCTGTTGTCATGACTGTGTATAAGCCTGCAAGGAAGGCAAAATCCGCTGTTTACAAATACAGAACAATTGAAAGAAAAAATACAAACAGTCAGCTGATGATCCTTGCCTGTTTCCATAGTGCAAGAAATATCCCATCAATGATAAATTTGATTGAGGCTTCAAGAGGAACCCAGAATCGGGATGCACTGAGTGTTTATGCAATGCACCTTAAAGAATTTTCTGAGAGATCATCATCAATACTAATGGTACATAAGGCTAGAAAAAACGGGTTACCATTCTTTAATAAACGTCATCGTGCAAATTGTGGCCATGTTGTTGTGGCATTTGAGGCTTACTGTCAACTAAGCCAAGTGTCTATCCGGCCAATGACAGCAATCTCGTCCATGACAAACATGCATGAGGACATTTGTGAAACAGCTGAAAGAAAGAGAGCTGCAGTCATTATTCTTCCATTTCATAAGCATCAAAGATTGGATGGCTCATTAGAAACTACAAGAAATGATTTTAGATTGGTTAACAAAAGGGTACTTGAGCATGCTCCATGTTCAGTTGGAATTCTTGTTGATCGTGGGCTCGGTGGTTCATCCCATGTATCTGCAAGCAATGTTTCTTACTGCATTATAGTTCTTTTCTTCGGTGGCAGTGATGACCGTGAGGCCCTCGCTTATGGAGCTCGTATGGCTGAGCACCCTGGCATAAGGTTAGTGGTTCTACACTTTGTTTTGGAACCAAGGATCGCAGGAGAGATTGTAATAGTTGATGTGAGCGAAGGCGATTCCCCCCAAACTGGCTCAGTCTCAGAGGACGAGGAGGTCCTTACTGAATTCAAGCAGAAAACAGCCAATGATGACTCTATCATCTATGAAGAGAAAGCAGTAAAAGATGGTGCAGAAACAGTTGCTGTTATCCGTGAATTTAGTCGATGTAATCTGTTTCTTGTTGGTCTAAAGCCAGAAGGTGAATTAGCCAATGCTTTGAACAGAAGTGAATACCCGGAACTGGGACCAGTCGGCGGTTTGTTGGTATCACAAGATTGCCCTACAGTAGCAACTGTTTTGGTGATGCAACAGTACCACAATGGGGTGAGGGGTGGCAGAAAAACTGATATGGAATAG 2385 0.4277 MASNSTSGNVCPPPMKPASNGVFQGDNPLDFALPLAILQICLVFVVTRGLAYLLRPLRQPRVVAEIVGGIILGPSALGRNKSYLQAIFPPRSLTVLDTLANLGLLFFLFLAGLELDPKSLRKTGSQALGIAIAGISLPFVLGIGSSYVLQATIAKGVDATAFLVFMGVALSITAFPVLARILAELKLLTSDVGRTAMSAAAVNDIAAWILLALAVALSGRSQSPFVSLWVFLSGCGFVICSILIVPPIFKWMTQRCHEGEPVDERYICATLVAVLAAGFVTDAIGIHAMFGSFVIGVLVPKDGPFAGALVEKLEDLVSGLFLPLYFVSSGLKTDIATIQGLQSWGLLALVIFTACFGKIVGTVVVSFFCKVPLKESLALGFLMNTKGLVELIVLNIGKDRKVLNDQTFAIMVLMALFTTFITTPVVMTVYKPARKAKSAVYKYRTIERKNTNSQLMILACFHSARNIPSMINLIEASRGTQNRDALSVYAMHLKEFSERSSSILMVHKARKNGLPFFNKRHRANCGHVVVAFEAYCQLSQVSIRPMTAISSMTNMHEDICETAERKRAAVIILPFHKHQRLDGSLETTRNDFRLVNKRVLEHAPCSVGILVDRGLGGSSHVSASNVSYCIIVLFFGGSDDREALAYGARMAEHPGIRLVVLHFVLEPRIAGEIVIVDVSEGDSPQTGSVSEDEEVLTEFKQKTANDDSIIYEEKAVKDGAETVAVIREFSRCNLFLVGLKPEGELANALNRSEYPELGPVGGLLVSQDCPTVATVLVMQQYHNGVRGGRKTDME* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1242 794 PANTHER CATION/H + ANTIPORTER 7 786 - -
Lan6g1242 794 Pfam Sodium/hydrogen exchanger family 42 425 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lan6g1242 794 PANTHER CATION/H(+) ANTIPORTER 18 7 786 - -
Lan6g1242 794 Gene3D - 505 752 - -
Lan6g1242 794 Gene3D - 35 440 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1242 Lan-Chr6 12689813 12693952 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1242 1 782 Antiporter Super Family AT5G41610 69.670 0.0 1088
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1242 - - gmx:100810155 1227.62