Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1237 ATGAACGACTCTGATGTCTCCAAGCAAATCGATCAGATGGTGAGATTTATCCGCCAAGAAGCGGAGGAAAAAGCCAACGAGATCTCTGTTTCTGCTGAAGAGGAATTCAACATCGAGAAACTTCAGTTGTTGGAGGCCGAGAAGAAGAAGATCAGGCAGGAATACGAGCGCAAAGAGAAACAAGTTGATATTCGGAAGAAGATTGAGTACTCGATGCAACTGAATGCTTCTCGGATTAAAGTTCTTCAAGCTCAAGATGATGTGGTTAATTTCATGAAAGAAGCTGCATCCAAGGAACTTTTGAGTCTGAGCAATTATGATACTGTGTACGGGAACCTTCTGAAAGATCTCATTGTCCAGAGTCTGCTAAGGCTGAAAGAACCTGCTGTCTTATTGAGATGTCGGGAAGATGACCTGCACTTGGTAGAGGAAGTGCTGGATTCAGCTGCACAGGAGTATGCTGACAAAGAAAATGTATATCTACCAGAGATCATTGTTGACAACACTGTCTTTCTCCCACCTGCACCCAGCCATCAGAATGTCCATGACCTCCACTGCTCTGGTGGGGTGGTGCTGGCTTCTCGAGATGGAAAGATTGTGTTTGAAAATACACTTGATGCACGACTGGATGTATTGTTCCGTAGCAAACTTCCAGAGATCCGGAAGCAGCTCTTTGGACAAGTTGCTGCTTGA 693 0.4488 MNDSDVSKQIDQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLLEAEKKKIRQEYERKEKQVDIRKKIEYSMQLNASRIKVLQAQDDVVNFMKEAASKELLSLSNYDTVYGNLLKDLIVQSLLRLKEPAVLLRCREDDLHLVEEVLDSAAQEYADKENVYLPEIIVDNTVFLPPAPSHQNVHDLHCSGGVVLASRDGKIVFENTLDARLDVLFRSKLPEIRKQLFGQVAA* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1237 230 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 230 IPR002842 GO:0033178|GO:0046961|GO:1902600
Lan6g1237 230 SUPERFAMILY V-type ATPase subunit E-like 87 226 - -
Lan6g1237 230 Gene3D - 92 229 IPR038495 -
Lan6g1237 230 Coils Coil 38 61 - -
Lan6g1237 230 Pfam ATP synthase (E/31 kDa) subunit 16 225 IPR002842 GO:0033178|GO:0046961|GO:1902600
Lan6g1237 230 PANTHER ARCHAEAL/VACUOLAR-TYPE H+-ATPASE SUBUNIT E 1 230 - -
Lan6g1237 230 Gene3D - 1 62 - -
Lan6g1237 230 Hamap V-type proton ATPase subunit E [atpE]. 8 226 IPR002842 GO:0033178|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1237 Lan-Chr6 12628677 12631789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1237 1 230 Primary Pumps ATPases(2) AT4G11150 76.087 1.12e-124 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1237 K02150 - egr:104443962 374.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0181 18 1625765 1629045 Lan6g1237 6 12628677 12631789 LSH