Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1225 ATGGAGAGTGACTTGAGCTGGGAGCAGAACACACTCATCAATGAGTTAATTCAAGGAATGGAGGTAGCAAGAAAGTTGAAGGCAGACTTGAAGACGCCATATTCAGTGGACACAAGGGAAATGTTGGTACAGAGGATATTATCTTCATATGAAAAGGCCCTACAGATTCTAAATGCATCAGCATCGATGTCGAGGACCACGAGTCCAACAACAGTGACTTCGTTACCAGAGTCGACAATATCTTTGGATGGAAATCCTACGGGGGATGGTATTTATGGGGCCATCAAGAGTGACAAGGAGATTAAACATGACTCAAAGAAAAGAAAGACAATGACCAAATGGATGGATCAAATTAGAGTGAGTTCAGAGAATGGCCTTGAAGGATCACATGAAGATGGCTACAACTGGAGAAAATATGGGCAGAAAGACATCCTTGGTGCCAAATATCCAAGAAGTTACTATAGGTGCACCTTCCGCAACACGCAGGGCTGCTGGGCCACGAAGCAAGTACAGAGATCAGATGAGGATCCCACTATATTTGACATAACTTACAGAGGAAAGCATACCTGTTCTCAGGGAAGTAATGCCTCTCTGCTACCTAAGTCACCAGAAGAACAAGAGAAACCACGTAGTCATAATAGTAATATTCATCATGCAAAGCAACCACAAGAAAGCCTTACCATGCTCAGAAACAACTTAACTGTCAAGACAGATAATCTAGGAAATGAAGAAATACCATATTCTTTCACTTTTCCATCGACTTCATTTGGATGCATGACACAAGAAAATCAAAGCTTACTTCCTTTGGCAGTAGACAATGATCCCTTCTTGAGCAGCCTTTTCCAAACACACTTATTATCTTCAACTATACCAGAGTCAAACTATTTCCCTTCTCCGTCTTTCCAGATGAATGAGTTTGATTGGGTCTATAACATGCCACATTCAGAATCTGATATTACTGAGATCATTTCCACCAACACATCAGTCACCAATTCTCCAATTCCCGAGTTCAATTTCCCACTTGATCCAGTGGAAATTAATCCAAATTTCCCTTTCAATTCCCCAGGATTCTTCTCCTGA 1080 0.4139 MESDLSWEQNTLINELIQGMEVARKLKADLKTPYSVDTREMLVQRILSSYEKALQILNASASMSRTTSPTTVTSLPESTISLDGNPTGDGIYGAIKSDKEIKHDSKKRKTMTKWMDQIRVSSENGLEGSHEDGYNWRKYGQKDILGAKYPRSYYRCTFRNTQGCWATKQVQRSDEDPTIFDITYRGKHTCSQGSNASLLPKSPEEQEKPRSHNSNIHHAKQPQESLTMLRNNLTVKTDNLGNEEIPYSFTFPSTSFGCMTQENQSLLPLAVDNDPFLSSLFQTHLLSSTIPESNYFPSPSFQMNEFDWVYNMPHSESDITEIISTNTSVTNSPIPEFNFPLDPVEINPNFPFNSPGFFS* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1225 359 MobiDBLite consensus disorder prediction 191 223 - -
Lan6g1225 359 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 355 IPR044810 GO:0003700
Lan6g1225 359 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 1 355 - -
Lan6g1225 359 Pfam WRKY DNA -binding domain 131 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan6g1225 359 Gene3D WRKY domain 116 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan6g1225 359 SUPERFAMILY WRKY DNA-binding domain 129 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan6g1225 359 SMART WRKY_cls 130 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan6g1225 359 ProSiteProfiles WRKY domain profile. 125 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1225 Lan-Chr6 12432084 12434177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1225 5 351 WRKY Transcription Factor Family AT4G11070 39.548 1.00e-68 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan6g1225 WRKY 8.3e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1225 - - gmx:100815760 528.094